Gene
| Gene Model ID | pfu_aug2.0_49.1_30084 |
|---|---|
| Locus | scaffold49.1 : 478071 ... 484074 : - |
| To GenomeBrowser | scaffold49.1:478071..484074 |
| Genes list of scaffold | scaffold49.1 |
| Synonym | pfu_aug1.0_117214.1_35381 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_49.1_30084.t1 | 2 | 1 | NAP | 7 | 100 | 8.8e-25 | 87.2 | 1.2e-28 | 8.8e-25 | 87.2 |
| pfu_aug2.0_49.1_30084.t1 | 2 | 2 | NAP | 122 | 135 | 8.8e-25 | 87.2 | 2.0 | 15000.0 | -5.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_49.1_30084.t1 | gi|507692424|ref|XP_004713402.1| | PREDICTED: protein SET [Echinops telfairi] | 0.0 |
| pfu_aug2.0_49.1_30084.t1 | gi|426257613|ref|XP_004022420.1| | PREDICTED: protein SET-like [Ovis aries] | 0.0 |
| pfu_aug2.0_49.1_30084.t1 | gi|542164135|ref|XP_005490699.1| | PREDICTED: protein SET [Zonotrichia albicollis] | 0.0 |
| pfu_aug2.0_49.1_30084.t1 | gi|698402252|ref|XP_009809103.1| | PREDICTED: protein SET [Gavia stellata] | 1.4013e-45 |
| pfu_aug2.0_49.1_30084.t1 | gi|197631815|gb|ACH70631.1| | SET translocation (myeloid leukemia-associated) B [Salmo salar] | 1.4013e-45 |
Transcript
| Transcript ID | pfu_aug2.0_49.1_30084.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30084.t1 atgttggaaagggagtattttgatggtaatcagtactttgaaaatgatgttatatcaaaagaatttcatctgaacgacac aggggaaccctcatccaaatctacgccaatcaaatggaaagcaggaaaagatttaacaaagaaatcaagtacaccgagta aaggtaatcgtaagaggaatttagaagaacaagaatcatttttctgttggtttacggatcacggtgacgcaggagcagat gaattaggagaagtcattaaagacgacatctggccaaatccattacaatattacctggcatcagaaatagaagaagatgg tggagaagatgaattagatgaagagggcatgatggatgaagaagagggagatgaagaggattttgatgaagatcaggagg aggtagagggtgaggatgatgaggagggaggagaggaggatggtgaagacgaaggttga |
|
Protein
| Protein ID | pfu_aug2.0_49.1_30084.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_49.1_30084.t1 MLEREYFDGNQYFENDVISKEFHLNDTGEPSSKSTPIKWKAGKDLTKKSSTPSKGNRKRNLEEQESFFCWFTDHGDAGAD ELGEVIKDDIWPNPLQYYLASEIEEDGGEDELDEEGMMDEEEGDEEDFDEDQEEVEGEDDEEGGEEDGEDEG |
|