Gene
| Gene Model ID | pfu_aug2.0_490.1_00807 |
|---|---|
| Locus | scaffold490.1 : 1 ... 2524 : + |
| To GenomeBrowser | scaffold490.1:1..2524 |
| Genes list of scaffold | scaffold490.1 |
| Synonym | pfu_aug1.0_11447.1_10324 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_490.1_00807.t1 | 1 | 1 | C1q | 22 | 143 | 2.8e-22 | 79.0 | 2.1e-26 | 3.1e-22 | 78.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_490.1_00807.t1 | gi|617469160|ref|XP_007574779.1| | PREDICTED: complement C1q-like protein 2 [Poecilia formosa] | 8.0e-19 |
| pfu_aug2.0_490.1_00807.t1 | gi|658910479|ref|XP_008395316.1| | PREDICTED: complement C1q-like protein 2 isoform X1 [Poecilia reticulata] | 2.0e-17 |
| pfu_aug2.0_490.1_00807.t1 | gi|585648167|ref|XP_002732902.2| | PREDICTED: complement C1q-like protein 2-like isoform X1 [Saccoglossus kowalevskii] | 8.0e-14 |
| pfu_aug2.0_490.1_00807.t1 | gi|148231165|ref|NP_001090380.1| | complement component 1, q subcomponent-like 4 precursor [Xenopus laevis] | 9.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_490.1_00807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_490.1_00807.t1 ccaattgcaatcaatgtggcggaggttttgcttcaccatgttcaccaaggggaatttcatttcttgcttggtactctaag caggacaaggagcttggagatcatgaggcagtcaaatacgacaaggtgattgaaaacctaggaaagggatacgatccttc tacagggaaattcaccgcccccgtatctggaatctactctatatcggctaccatgatgagcgagccaaagaatcatatgc accttggaataatgaagaattcccagaccttaacggtcttgttctcgaacaagaaaacatacccgcaagcttcaaccacc ttgaatgtgttcctaaacaaaggggatacagcatgggtacaacgccattcaggaagggttcttcatgcacacattaacgg acgctacaatgtcttctccggagttctgattaccccaatgtag |
|
Protein
| Protein ID | pfu_aug2.0_490.1_00807.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_490.1_00807.t1 NCNQCGGGFASPCSPRGISFLAWYSKQDKELGDHEAVKYDKVIENLGKGYDPSTGKFTAPVSGIYSISATMMSEPKNHMH LGIMKNSQTLTVLFSNKKTYPQASTTLNVFLNKGDTAWVQRHSGRVLHAHINGRYNVFSGVLITPM |
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