Gene
| Gene Model ID | pfu_aug2.0_490.1_00815 |
|---|---|
| Locus | scaffold490.1 : 271936 ... 293813 : + |
| To GenomeBrowser | scaffold490.1:271936..293813 |
| Genes list of scaffold | scaffold490.1 |
| Synonym | pfu_aug1.0_55.1_29042 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| microspherule protein 1 isoform x3 | GO:0000123 GO:0005515 GO:0005730 GO:0005737 GO:0006281 GO:0006310 GO:0006355 GO:0015629 GO:0030054 GO:0031011 GO:0043981 GO:0043982 GO:0043984 GO:0043995 GO:0043996 GO:0046972 GO:0071339 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_490.1_00815.t1 | 3 | 1 | MCRS_N | 61 | 73 | 3.2e-39 | 134.5 | 0.47 | 3500.0 | -2.7 |
| pfu_aug2.0_490.1_00815.t1 | 3 | 2 | MCRS_N | 152 | 170 | 3.2e-39 | 134.5 | 2.1e-06 | 0.016 | 14.7 |
| pfu_aug2.0_490.1_00815.t1 | 3 | 3 | MCRS_N | 168 | 276 | 3.2e-39 | 134.5 | 7.30006e-41 | 5.4e-37 | 127.2 |
| pfu_aug2.0_490.1_00815.t1 | 1 | 1 | FHA | 308 | 380 | 8.5e-07 | 29.0 | 2.2e-10 | 1.6e-06 | 28.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_490.1_00815.t1 | gi|524894905|ref|XP_005103942.1| | PREDICTED: microspherule protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_490.1_00815.t1 | gi|556946057|ref|XP_005986320.1| | PREDICTED: microspherule protein 1 isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_490.1_00815.t1 | gi|602659611|ref|XP_007435495.1| | PREDICTED: microspherule protein 1 isoform X2 [Python bivittatus] | 0.0 |
| pfu_aug2.0_490.1_00815.t1 | gi|555968864|ref|XP_005896463.1| | PREDICTED: microspherule protein 1 isoform X3 [Bos mutus] | 0.0 |
| pfu_aug2.0_490.1_00815.t1 | gi|586479214|ref|XP_006870138.1| | PREDICTED: microspherule protein 1 isoform X2 [Chrysochloris asiatica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_490.1_00815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_490.1_00815.t1 atgtcgtcaatggagcagtctcttaaacaagacgctacacagacgacaaagtctgacacaagccttgtgaggaccaatca gattactacaacgaaatcggtaccaacactaacgtttccctcgtctagccttcataatgttacaggtcagctaagtagcg aagcggctaaaagtttagcacaaagtgtggagagacgctcacggagagaaataaaacggaagaaatttgatgatgaagta gtggaaagcagtctgcttaagacagaaacgcggaaagtgagacctccgccacttcctggtcaacaagaaaaaccagagag tgtagaaaaagaggctccgctaatcccccctccagaaaaaaagaagtctggtaaaaatgctgctgcagcaaaaagggcaa agaagcaaaaagttggtcaaccaccagcacctgcatcaacaaaggatttaggacgatggaaagctcaggatgacatagct ctgattacagctgtacaacagactagtcagccaaatgtgtccgtgttccaagacttgttagattccaatcctgagaagtt ttacccgttacgctcggctaaagcgttacacactcattggttattgatgaaacagtatcatttgttacccgaccaatcag tgcagcccattccgaggggagaccacgtccttaatttctcagatgctgaggatatgcagaatgatgaagatatcaaagat ggaaaagaggacatacttgagcaagagctgacagttgctgataggagaaataaacgtgagattcgccatctggagcagga gttaccgaagtggcaggtgcttgttgacagtgttactggtatcagtccgccagattttgacaatcagacgctggctgtgt taagaggaaggctggtgcgctatctgatgaggtctagagagataactcttggcagagctacgaaggacaaccaaatagac gtagatttatctctcgagggtccggcatggaaaatatctagacggcagggaatcatcaaattacggaatacgggtgattt ttacatcgcaaacgaggggaaaagaccaatatatgtggacggcaaaccaattatggcggggaataaacagaaattaagca ataattctgtagtagagatatcgtgcttgcggtttattttcttaattaaccaggacttgattaatgtaatacgctcagaa tctcagaaactttccaatagctag |
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Protein
| Protein ID | pfu_aug2.0_490.1_00815.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_490.1_00815.t1 MSSMEQSLKQDATQTTKSDTSLVRTNQITTTKSVPTLTFPSSSLHNVTGQLSSEAAKSLAQSVERRSRREIKRKKFDDEV VESSLLKTETRKVRPPPLPGQQEKPESVEKEAPLIPPPEKKKSGKNAAAAKRAKKQKVGQPPAPASTKDLGRWKAQDDIA LITAVQQTSQPNVSVFQDLLDSNPEKFYPLRSAKALHTHWLLMKQYHLLPDQSVQPIPRGDHVLNFSDAEDMQNDEDIKD GKEDILEQELTVADRRNKREIRHLEQELPKWQVLVDSVTGISPPDFDNQTLAVLRGRLVRYLMRSREITLGRATKDNQID VDLSLEGPAWKISRRQGIIKLRNTGDFYIANEGKRPIYVDGKPIMAGNKQKLSNNSVVEISCLRFIFLINQDLINVIRSE SQKLSNS |
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