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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_4900.1_02676
Locus scaffold4900.1 : 29866 ... 31280 : +
To GenomeBrowser scaffold4900.1:29866..31280
Genes list of scaffold scaffold4900.1
Synonym pfu_aug1.0_1741.1_15602

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_4900.1_02676.t1 gi|260809226|ref|XP_002599407.1| hypothetical protein BRAFLDRAFT_102685 [Branchiostoma floridae] 3.0e-39
pfu_aug2.0_4900.1_02676.t1 gi|724900126|ref|XP_010377263.1| PREDICTED: heat shock 70 kDa protein 12B isoform X2 [Rhinopithecus roxellana] 4.0e-39
pfu_aug2.0_4900.1_02676.t1 gi|585689663|ref|XP_006894269.1| PREDICTED: heat shock 70 kDa protein 12B isoform X4 [Elephantulus edwardii] 5.0e-39

Transcript
Transcript IDpfu_aug2.0_4900.1_02676.t1
Definition-
>pfu_aug2.0_4900.1_02676.t1
atgaatacttgcaatcacccgacgtgcacgactgtcaccaagagaggtagaggtacagttgatatagcacttcataagaa
actggaagatgacagaattcaagaattgtaccaagcaagtggcggaccctttggtggaacagctgttgacgaggcctact
tacaactgttaacgcgggctttcggaggtccaatgatgtaccagtttcgaaaggagtttaccttcgactttttggatatg
atgaaagaatttgaggtggccaaacgcaatctgaaaccgtccggtctcctttcattcaatacaaaattaccaatatcttt
tggtaagtgttgcgagcaacagaataacgagaccctgaacgaaatcgtatcggcaagtaatttccctttcaaaggaaaaa
ttaaagtcattggcgataaattgtcgatcaaggcagacataatgcttgaaattttctcgtcggtcaccacaaaaattacc
gacatcgtacaagagattctctgccaacctgttgcagaaacatgtcaaattctcttgcttgttgggggttttgcagaatc
cgagtgtgtgcaagaggccattaaagataagtttgaaacagaggcacgacgagttatagtgcctgctgaatcaggtttga
cagtagtaaaaggtgcaaccatttttggacatagaagaagtctgggtattattactgagagggtcatgaggcatacatat
ggcattgctgctcattcaaaattcgatagcacaaagcataaacaagagtacaaagaagtccaatcaggaaaagacatcat
taatgaattttcaccgtttatgaagaagggcacgtctgtagaagaaggaactattgtcaagaaagaataccgtttcgagg
agttaacagaaaacagtgttatattagtatactcttcaaccagagatgtcaagtttatcaaagaaggtggattagaagaa
cttgttaggattgaggttggcgaaaatacggaacagttctacggtaaaagagttgatgttgaggtatcatttatattcgg
atatacagagctccaaatcgaagtcttttgtcttgaaatggggagctcatttagtgccaaagtagcaaattataactaa

Protein
Protein IDpfu_aug2.0_4900.1_02676.t1
Definition-
>pfu_aug2.0_4900.1_02676.t1
MNTCNHPTCTTVTKRGRGTVDIALHKKLEDDRIQELYQASGGPFGGTAVDEAYLQLLTRAFGGPMMYQFRKEFTFDFLDM
MKEFEVAKRNLKPSGLLSFNTKLPISFGKCCEQQNNETLNEIVSASNFPFKGKIKVIGDKLSIKADIMLEIFSSVTTKIT
DIVQEILCQPVAETCQILLLVGGFAESECVQEAIKDKFETEARRVIVPAESGLTVVKGATIFGHRRSLGIITERVMRHTY
GIAAHSKFDSTKHKQEYKEVQSGKDIINEFSPFMKKGTSVEEGTIVKKEYRFEELTENSVILVYSSTRDVKFIKEGGLEE
LVRIEVGENTEQFYGKRVDVEVSFIFGYTELQIEVFCLEMGSSFSAKVANYN

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