Gene
| Gene Model ID | pfu_aug2.0_492.1_07589 |
|---|---|
| Locus | scaffold492.1 : 93166 ... 142657 : + |
| To GenomeBrowser | scaffold492.1:93166..142657 |
| Genes list of scaffold | scaffold492.1 |
| Synonym | pfu_aug1.0_10.1_21905 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_492.1_07589.t1 | 12 | 1 | Ldl_recept_a | 31 | 71 | 0.0 | 233.2 | 9.7e-08 | 0.00011 | 22.0 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 2 | Ldl_recept_a | 73 | 107 | 0.0 | 233.2 | 8.0e-11 | 9.1e-08 | 31.8 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 3 | Ldl_recept_a | 111 | 146 | 0.0 | 233.2 | 1.7e-09 | 1.9e-06 | 27.6 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 4 | Ldl_recept_a | 150 | 185 | 0.0 | 233.2 | 1.5e-16 | 1.7e-13 | 50.2 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 5 | Ldl_recept_a | 188 | 218 | 0.0 | 233.2 | 1.0e-07 | 0.00012 | 21.9 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 6 | Ldl_recept_a | 221 | 256 | 0.0 | 233.2 | 2.6e-06 | 0.003 | 17.4 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 7 | Ldl_recept_a | 276 | 305 | 0.0 | 233.2 | 1.6e-06 | 0.0019 | 18.0 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 8 | Ldl_recept_a | 393 | 427 | 0.0 | 233.2 | 8.6e-06 | 0.0098 | 15.7 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 9 | Ldl_recept_a | 430 | 466 | 0.0 | 233.2 | 4.8e-12 | 5.5e-09 | 35.7 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 10 | Ldl_recept_a | 471 | 505 | 0.0 | 233.2 | 3.5e-06 | 0.004 | 17.0 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 11 | Ldl_recept_a | 509 | 549 | 0.0 | 233.2 | 7.5e-10 | 8.6e-07 | 28.7 |
| pfu_aug2.0_492.1_07589.t1 | 12 | 12 | Ldl_recept_a | 553 | 590 | 0.0 | 233.2 | 8.4e-09 | 9.6e-06 | 25.3 |
| pfu_aug2.0_492.1_07589.t1 | 4 | 1 | LRR_8 | 626 | 663 | 9.9e-36 | 121.3 | 4.7e-05 | 0.053 | 13.2 |
| pfu_aug2.0_492.1_07589.t1 | 7 | 1 | LRR_1 | 627 | 647 | 5.5e-10 | 37.8 | 0.38 | 430.0 | 1.6 |
| pfu_aug2.0_492.1_07589.t1 | 5 | 1 | LRR_4 | 628 | 665 | 1.9e-14 | 52.9 | 0.0098 | 11.0 | 5.7 |
| pfu_aug2.0_492.1_07589.t1 | 7 | 2 | LRR_1 | 653 | 674 | 5.5e-10 | 37.8 | 0.00011 | 0.12 | 12.4 |
| pfu_aug2.0_492.1_07589.t1 | 4 | 2 | LRR_8 | 654 | 711 | 9.9e-36 | 121.3 | 2.2e-18 | 2.5e-15 | 55.9 |
| pfu_aug2.0_492.1_07589.t1 | 5 | 2 | LRR_4 | 654 | 692 | 1.9e-14 | 52.9 | 1.9e-06 | 0.0021 | 17.6 |
| pfu_aug2.0_492.1_07589.t1 | 7 | 3 | LRR_1 | 677 | 697 | 5.5e-10 | 37.8 | 0.0089 | 10.0 | 6.6 |
| pfu_aug2.0_492.1_07589.t1 | 5 | 3 | LRR_4 | 679 | 716 | 1.9e-14 | 52.9 | 1.9e-09 | 2.2e-06 | 27.1 |
| pfu_aug2.0_492.1_07589.t1 | 4 | 3 | LRR_8 | 699 | 759 | 9.9e-36 | 121.3 | 5.3e-16 | 6.1e-13 | 48.3 |
| pfu_aug2.0_492.1_07589.t1 | 7 | 4 | LRR_1 | 700 | 717 | 5.5e-10 | 37.8 | 0.11 | 130.0 | 3.2 |
| pfu_aug2.0_492.1_07589.t1 | 5 | 4 | LRR_4 | 724 | 759 | 1.9e-14 | 52.9 | 1.1e-07 | 0.00012 | 21.5 |
| pfu_aug2.0_492.1_07589.t1 | 7 | 5 | LRR_1 | 724 | 745 | 5.5e-10 | 37.8 | 0.00073 | 0.83 | 9.9 |
| pfu_aug2.0_492.1_07589.t1 | 4 | 4 | LRR_8 | 751 | 801 | 9.9e-36 | 121.3 | 6.2e-15 | 7.1e-12 | 44.9 |
| pfu_aug2.0_492.1_07589.t1 | 7 | 6 | LRR_1 | 751 | 770 | 5.5e-10 | 37.8 | 0.0085 | 9.8 | 6.6 |
| pfu_aug2.0_492.1_07589.t1 | 5 | 5 | LRR_4 | 773 | 801 | 1.9e-14 | 52.9 | 0.0016 | 1.8 | 8.2 |
| pfu_aug2.0_492.1_07589.t1 | 7 | 7 | LRR_1 | 773 | 794 | 5.5e-10 | 37.8 | 0.063 | 72.0 | 4.0 |
| pfu_aug2.0_492.1_07589.t1 | 1 | 1 | 7tm_1 | 850 | 1106 | 4.8e-30 | 104.5 | 5.9e-33 | 6.8e-30 | 104.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_492.1_07589.t1 | gi|662188542|ref|XP_008487951.1| | PREDICTED: G-protein coupled receptor GRL101-like [Diaphorina citri] | 0.0 |
| pfu_aug2.0_492.1_07589.t1 | gi|242005821|ref|XP_002423759.1| | class A rhodopsin-like G-protein coupled receptor GPRgph, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_492.1_07589.t1 | gi|585680860|ref|XP_006819774.1| | PREDICTED: G-protein coupled receptor GRL101-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_492.1_07589.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07589.t1 atgcacaagttcttagatcatcttcagtttattgtcagtacttatgtttcaggagatgacgaggaaatcactgcattaac gtctgaagaacgttgtaaggcttccgacatgtttctgtgtaacgatgtaggctcggagtgtataccctcggactatgtat gtaacggtgtcagcgaatgtagcaccggcagagatgagaacgtacttacatgtggatgccttgacaatgagttccagtgt aacacaacagtttgtatagatatgataaggagatgtgacacacatatggactgtgaaaatggagttgacgaggcagattg taagttatatacgtgtcctatgacccatagtaaatgcgccaatcatttctgtgtccctcgtgatgctttgtgtgatttca agaatgattgcggtgacaacagtgacgaggaagattgcgatttcaaaccatgttactctacgcaattccgatgtaacaac agccagtgtataagtataggatgggtatgtgacggagaaagcgattgtatggacggaagtgacgaaacaaattgtgatag ccaactacgctgtgataatggtgtaccccttaagactagtcagaggtgtgacggttggatagactgtgacgaccagagtg acgaaagtagctgtagcatctgcgaatcaggatattttatgtgcgacaatggacgatgtctgagaaactcaaatgtatgt gatctcaagtgtgactgtggaacaacttgtgaagatgaacagggatgtgctcaatactcctgtgaggttggtatgaagtt tgcctgtcgagatctaattaccggggagacatcgcgatgtatcgatgcccattacgtgtgtgacggcatcaatgactgct gggatagcggggaaggtaccgacgaatcagcgtgtatcgagaaggaaaggccaaatcgtgagaattcccatcggaacggc tgcgaaagccggaatgaacaacactccgaagtgaggccatgtgcctggggagagtcagagtctcctgattgcatgcaaca cccgtcgcaacagctccatggaaacagctccatggaacagctccatggaaatcaaaagtattgttcaatcgtgtattcgt gtagcggaaacatctcccagcaatgcgaggacgcttctaggagagacgggatacagtactttccctgctccgagggccga tgtctccctgctcagggaccgggaaatgtcctttgtaactatttttacgactgtatcaacggggaagacgaattaggctg tgtgtttcccgagtgcagcaaggatgacttcagatgtgacaataaccaatgtattcctacagagaagagatgtaatggag tggccgattgctttgattggacagatgaacagttctgtgaggatctggattgtacttcgtatgagcggagatgtgatagt ggtcagtgtgtccttcaggacaagtggtgtgatttcttcataaattgtcctgatgcttctgacgaacaagattgcgagta cagaccatgtaagccatgggagttcagatgtaacaatggacagtgtattgattcagagtacgtttgttatggagggaata agaacactgacaagggatgcatggaccagtctcatctctttcattgtgcctcggctaattgcacgtctgagcaattcaaa tgtcgtaattcatattgtgtggacttggactccagatgtgacgggcggttagattgtcctaaatggtcgtacgaggacga actcggatgtccctatacgtgtccatttcggacgaacgaatgcatttgtaatgacgacgaacttaactgcactcagaggg gtcttcgatctattcctactgaccttgaattggagaatcaactgacgaaatttattttgagtgggaacttcctgaacacc agccttaacagacatacattcaaggaataccaaagcatcattcatttagatctgagcaataattcaattgaaatcattcc acaaggctgtttccagtatctataccggctattgaccttgaatttggcgaacaacaaaataaggacgatatcaaatggaa cgtttataggactgtccaacgtcagaacactatatctggaagggaacgctatcgccgacattcaatcatttggacttacg ggtctctccaatctacagaccttggacctaagtcatcaacgtattaaggagatcctccccagtactttcatcgggctcag aagtgtctacaaattagatttatcccacaatgagataatacagatacatgacggtgccttcaatggactcccaggcctcc tcactctaattatatctgagaacaatatccaagttatccagcagaatgttttccatggattgccatcattacactctcta tacacagacgagtttccattctgctgtttggcgcgctatgtacacaaatgttatcccgaacccgacgagttttcctcgtg tgaagacctgatgtccaactatctgttacgtgtggctgtctggatattgggcatattagcgtttcttggaaatattttgg ttttcatttggcgcatacatgataacagaaacggaaaggttcattcattcttaattacaaatcttgctattggagatttc tttatgggggtatacttacttataatagccgtcgtggatagttattatagaggaaagtactttatatcagataaaacatg gcgggaaagtgacttgtgtaaattcgcaggattcatatcaactttttctagtgagttatcggtgtttacattgacaatca tcactatagacagacttatttgtattatattcccattgaaactgaaaagattgggaataaaggagatgctgattgtaatg ccatgtatttggattttagtgacagttctctctggagcaccgctgttcggaatagactatttcgagaacttttacggtcg ttctggggtatgtctggctttgcatatcactccagaaaaaccgaaaggctgggagtattcagtatttgtgtttttagttt taaatttagtgtcatttctcacgatattaatttcatacttgtggatgtttcttgtcgctaagcagactactactgcagtg cgtaaatcaaaggccaaatccgacaaatctatggccaagaggatgaccctaattgttatgtcagacttctgctgttggat tccaatcatcttgttagggtttgcttcattaggtggagctcatgtgccaccacaggtgtatgcctgggtggcggtgtttg ttttacctttgaattctgccatgaacccaattctgtataccatctccactgcgccattcatgagaaatatccgtaaacga gtccaacgattccggaaatccttcactgggtcgcttcgcacaagtgagactaaacattcttttatagatggttcctccca cagctggaataagaattccatgtacagacaactagagctaaccaggctccgaggtctgaagaaaacatacgtaccaaata cgtcattacaaaacaaccagaagtcaacacggagtagagacagaacttcatga |
|
Protein
| Protein ID | pfu_aug2.0_492.1_07589.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07589.t1 MHKFLDHLQFIVSTYVSGDDEEITALTSEERCKASDMFLCNDVGSECIPSDYVCNGVSECSTGRDENVLTCGCLDNEFQC NTTVCIDMIRRCDTHMDCENGVDEADCKLYTCPMTHSKCANHFCVPRDALCDFKNDCGDNSDEEDCDFKPCYSTQFRCNN SQCISIGWVCDGESDCMDGSDETNCDSQLRCDNGVPLKTSQRCDGWIDCDDQSDESSCSICESGYFMCDNGRCLRNSNVC DLKCDCGTTCEDEQGCAQYSCEVGMKFACRDLITGETSRCIDAHYVCDGINDCWDSGEGTDESACIEKERPNRENSHRNG CESRNEQHSEVRPCAWGESESPDCMQHPSQQLHGNSSMEQLHGNQKYCSIVYSCSGNISQQCEDASRRDGIQYFPCSEGR CLPAQGPGNVLCNYFYDCINGEDELGCVFPECSKDDFRCDNNQCIPTEKRCNGVADCFDWTDEQFCEDLDCTSYERRCDS GQCVLQDKWCDFFINCPDASDEQDCEYRPCKPWEFRCNNGQCIDSEYVCYGGNKNTDKGCMDQSHLFHCASANCTSEQFK CRNSYCVDLDSRCDGRLDCPKWSYEDELGCPYTCPFRTNECICNDDELNCTQRGLRSIPTDLELENQLTKFILSGNFLNT SLNRHTFKEYQSIIHLDLSNNSIEIIPQGCFQYLYRLLTLNLANNKIRTISNGTFIGLSNVRTLYLEGNAIADIQSFGLT GLSNLQTLDLSHQRIKEILPSTFIGLRSVYKLDLSHNEIIQIHDGAFNGLPGLLTLIISENNIQVIQQNVFHGLPSLHSL YTDEFPFCCLARYVHKCYPEPDEFSSCEDLMSNYLLRVAVWILGILAFLGNILVFIWRIHDNRNGKVHSFLITNLAIGDF FMGVYLLIIAVVDSYYRGKYFISDKTWRESDLCKFAGFISTFSSELSVFTLTIITIDRLICIIFPLKLKRLGIKEMLIVM PCIWILVTVLSGAPLFGIDYFENFYGRSGVCLALHITPEKPKGWEYSVFVFLVLNLVSFLTILISYLWMFLVAKQTTTAV RKSKAKSDKSMAKRMTLIVMSDFCCWIPIILLGFASLGGAHVPPQVYAWVAVFVLPLNSAMNPILYTISTAPFMRNIRKR VQRFRKSFTGSLRTSETKHSFIDGSSHSWNKNSMYRQLELTRLRGLKKTYVPNTSLQNNQKSTRSRDRTS |
|