Gene
| Gene Model ID | pfu_aug2.0_492.1_07591 |
|---|---|
| Locus | scaffold492.1 : 160552 ... 173145 : - |
| To GenomeBrowser | scaffold492.1:160552..173145 |
| Genes list of scaffold | scaffold492.1 |
| Synonym | pfu_aug1.0_10.1_21908 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homer protein homolog 2 | GO:0044464 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_492.1_07591.t1 | 1 | 1 | WH1 | 64 | 166 | 1.4e-31 | 108.4 | 2.1e-34 | 2.8e-31 | 107.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_492.1_07591.t1 | gi|210076897|gb|ACJ06771.1| | homer [Aplysia californica] | 0.0 |
| pfu_aug2.0_492.1_07591.t1 | gi|269785283|ref|NP_001161569.1| | homer-like protein [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_492.1_07591.t1 | gi|556957043|ref|XP_005989682.1| | PREDICTED: homer protein homolog 2 isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_492.1_07591.t1 | gi|556957040|ref|XP_005989681.1| | PREDICTED: homer protein homolog 2 isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_492.1_07591.t1 | gi|525008958|ref|XP_005052119.1| | PREDICTED: homer protein homolog 2 [Ficedula albicollis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_492.1_07591.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07591.t1 atgatggctctgaagactttttctacaagtttttctcggcgctcctcggattccgctgtaatgcaccgacaacattccgc agattgcgtctcgcttatttcaaggaggtgtcaatttttctccgaagagagcacatcttttgaagatgacgtgttcgaaa attgcagcgtcatagatttagaaacggagcagcccattttcaccacaaaggcccatgtgttccagatagatccagaaacc aagaagaactggataccatgtagtaaaagtgctgtcagtatatcatattaccatgactctaccaggaacacgtataggat catcagtgttgatggatctaaggccattgtcaacagtaccattaccccagggatgaccttcactaagacgtcccagaagt ttggacagtggtcagatcctcgggccagcactgtgtatggtctgggcttcccgtcagagctggacttgagtaagttcata gagaagtttaaggaggtcaaggaattaacccgccaagccgcagctcaacaagccatccaacaacaacaacaacaaaattc tccgcaggtgaacggcaacgatgaaaatcactctgctacccagtctccctctcctcaacaacgtcatttcttacatcaca gaagctcctctctctctgccatgcagggtcaagaaaataatagtaaagaaccagtaaatttaaaggagagaaggaattct tttaatactccagggtctcccaatagtaacgctgccaactctccagatagccaactcaaatatgaaaacgacaggctgaa attagccttagcacaaagatgtacagaccatacaacgttattttttacaagatacatgatacgatgtgatacacgcatgg tagcggagctagagaagaggcagagtgggtcagagcaggtggctgctctacaggcagagctacaacaactgacagagagg ttagagagggtacagctagagaaacaagataaacaggaggaagtcaatgagttacaacagagggttaatgaactccaagc caaggaaaatcagagctcctctttacagaccagaattaagaaacttgaggaggagaatagacatttagaactgaaagtag aagatttccagaggcaattaacagagtgtagaatgatgcaggatcaggacaattcagaactactccgattacaggactcc ctcggaaataaggtcaccgagttatatgaaattcacgaacaaattgttgcgacaatcaggaaagagtcaaacagttga |
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Protein
| Protein ID | pfu_aug2.0_492.1_07591.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07591.t1 MMALKTFSTSFSRRSSDSAVMHRQHSADCVSLISRRCQFFSEESTSFEDDVFENCSVIDLETEQPIFTTKAHVFQIDPET KKNWIPCSKSAVSISYYHDSTRNTYRIISVDGSKAIVNSTITPGMTFTKTSQKFGQWSDPRASTVYGLGFPSELDLSKFI EKFKEVKELTRQAAAQQAIQQQQQQNSPQVNGNDENHSATQSPSPQQRHFLHHRSSSLSAMQGQENNSKEPVNLKERRNS FNTPGSPNSNAANSPDSQLKYENDRLKLALAQRCTDHTTLFFTRYMIRCDTRMVAELEKRQSGSEQVAALQAELQQLTER LERVQLEKQDKQEEVNELQQRVNELQAKENQSSSLQTRIKKLEEENRHLELKVEDFQRQLTECRMMQDQDNSELLRLQDS LGNKVTELYEIHEQIVATIRKESNS |
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