Gene
| Gene Model ID | pfu_aug2.0_492.1_07592 |
|---|---|
| Locus | scaffold492.1 : 191760 ... 198032 : + |
| To GenomeBrowser | scaffold492.1:191760..198032 |
| Genes list of scaffold | scaffold492.1 |
| Synonym | pfu_aug1.0_31774.1_19418 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| activator of basal | GO:0097159 GO:1901363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_492.1_07592.t1 | 1 | 1 | RRM_6 | 24 | 97 | 6.3e-09 | 35.6 | 1.9e-12 | 9.3e-09 | 35.1 |
| pfu_aug2.0_492.1_07592.t1 | 1 | 1 | RRM_1 | 24 | 97 | 8.6e-07 | 28.5 | 2.8e-10 | 1.4e-06 | 27.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_492.1_07592.t1 | gi|156366327|ref|XP_001627090.1| | predicted protein [Nematostella vectensis] | 6.0e-33 |
| pfu_aug2.0_492.1_07592.t1 | gi|241835279|ref|XP_002415030.1| | activator of basal transcription, putative [Ixodes scapularis] | 4.0e-31 |
| pfu_aug2.0_492.1_07592.t1 | gi|242025622|ref|XP_002433223.1| | Activator of basal transcription, putative [Pediculus humanus corporis] | 9.0e-30 |
| pfu_aug2.0_492.1_07592.t1 | gi|112983154|ref|NP_001037600.1| | CG10993-like protein [Bombyx mori] | 2.0e-29 |
| pfu_aug2.0_492.1_07592.t1 | gi|340369733|ref|XP_003383402.1| | PREDICTED: pre-rRNA-processing protein esf2-like [Amphimedon queenslandica] | 2.0e-29 |
Transcript
| Transcript ID | pfu_aug2.0_492.1_07592.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07592.t1 atggagaataacgtacccgaggaacaagtgcccgtgaaaacaacaaagaaacatgtaaagccaggcgttatttatttgag cagagtgccacctctgatgactgttaaaaaaataagagacattttttgcgaattcgatgaaattggacgaatttttctac aacctgatgagagagctgcgcatggtaagaaaggaagatcattcacggagggatgggtggaatttggagataagcggaaa gcgaaaatggtggctatgaaactgaacaatacaacaataggaggcaaaaagaaaagccgatggtatgatgaactgtggaa tataaaataccttcacaggttgaaatctttgaaaaacaaactccttccatatctgtnagtaagaagacattaa |
|
Protein
| Protein ID | pfu_aug2.0_492.1_07592.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07592.t1 MENNVPEEQVPVKTTKKHVKPGVIYLSRVPPLMTVKKIRDIFCEFDEIGRIFLQPDERAAHGKKGRSFTEGWVEFGDKRK AKMVAMKLNNTTIGGKKKSRWYDELWNIKYLHRLKSLKNKLLPYLXVRRH |
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