Gene
| Gene Model ID | pfu_aug2.0_492.1_07593 |
|---|---|
| Locus | scaffold492.1 : 204928 ... 252589 : - |
| To GenomeBrowser | scaffold492.1:204928..252589 |
| Genes list of scaffold | scaffold492.1 |
| Synonym | pfu_aug1.0_5423.1_59773 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_492.1_07593.t1 | 4 | 1 | Homeobox | 295 | 361 | 2.8e-14 | 52.4 | 9.0e-08 | 0.0013 | 18.2 |
| pfu_aug2.0_492.1_07593.t1 | 4 | 2 | Homeobox | 738 | 795 | 2.8e-14 | 52.4 | 2.8e-11 | 4.2e-07 | 29.4 |
| pfu_aug2.0_492.1_07593.t1 | 4 | 3 | Homeobox | 899 | 912 | 2.8e-14 | 52.4 | 0.62 | 9200.0 | -3.7 |
| pfu_aug2.0_492.1_07593.t1 | 4 | 4 | Homeobox | 958 | 1020 | 2.8e-14 | 52.4 | 1.1e-06 | 0.017 | 14.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_492.1_07593.t1 | gi|676443478|ref|XP_009050127.1| | hypothetical protein LOTGIDRAFT_173809 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_492.1_07593.t1 | gi|512932010|ref|XP_004932440.1| | PREDICTED: uncharacterized protein LOC101738767 [Bombyx mori] | 0.0 |
| pfu_aug2.0_492.1_07593.t1 | gi|642911930|ref|XP_008199026.1| | PREDICTED: DNA-binding protein SATB1 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_492.1_07593.t1 | gi|270014467|gb|EFA10915.1| | hypothetical protein TcasGA2_TC001741 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_492.1_07593.t1 | gi|642911928|ref|XP_967929.2| | PREDICTED: uncharacterized protein LOC656296 isoform X1 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_492.1_07593.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07593.t1 atggatttccatgcagcgatggagacttttgcagaggcatgggttgctgcgaatacccaaactgcagtgaactccgatcc tcaggcagtgaaatctacatcctctgaagaattaccgacattactacctaaagaccagctgacatccaagtctactgagc accaacaacaacctcctggccagacccagcactccccacctgtgggggcaggtgtaaaatcacttccaattcactgtgtg atcgagcagaccactgggccgctgacttttgaggcggacagttccgggagttctaatattgaactggacagctacgcaat tctacctagttccaccttattcagcgagctcgtccggacatcattggtcaaactcggctacagtgccacagaaacaatca atgcaaaaggggctattcaaataaagaactggaagccattaagtttcgacatcataacatctgataagaatgcatctcta gatgacatcctaggagagctcacccaagtggctactttaagaattcgactttgcagtcaaacgaaggtcagttcagcaga ggaaatcaaagggaagctactgcagttactcctgacacagtcccaagatcttcttctgaaagcaggttgccctattgaaa agagcctgttgtcgtccatttcgatgggagagcatttgacacatcttccatcagagataaggaagtcctttgacaaatgg tacagggaagaacttctgaagtcacagaaattgatagagaattctgtaacggtccctgaagcttctccagataaacacag aatggtgaagactcccccttcagacccccttcctaatagtcaatccccctctagtatgtacatgcccctggtcggcaaaa cgcgcatgcgtacatctttcgatcctgagcatgaaattccccgtcttcagaaatggtttcaagaaaaccagcatccccca agagagttgatgatacgttatttagatgagctcaactctctagactctaggaaaggtaggaggccactggatcttactaa tatcatctactggttcaagaatgcccgcgctgcccatcgcagggcgtcacgatgctttgagggtgacggaggttttgaaa tggaggaaagccaggatctgagcccgagtgggagtgatacaaatcacagctttctgaataagcatcccctgtatatgctg ccatatgcctatgcaggaatgtatgggtcacatgatatgtcatgtgacatgaaggagccatgcgacttgtcacagggatc aaagacaagaaacaaagatgcaagcccggtggaggaagagaagaaaggggagtccaaggtgttgaatcaaattaagtctg atgaaggaaaagcaagtgtgaatgaggaaatggacataaagaaagagaatgaagaaattgagaaagatgataccaaagga tctgagcttagtcctaaacatagtgatgcctcaatgccagtcctccccaataagaatgcagtatatgttctaccctatcc atatcatggcaaggatcaagagagaaatgatggcagtcaggaggacaggaagccctgtgatctcactaattctaacaaat caaaatctagtcaaaatgaaagcctctggaagaaagaagtaggtgctcatgataaagaaaatagaatctgcattgaaaac agtcataggatggacgaagaagacgagcttatacataatggtggtatagaaacctcaaagggggtgctaagtgatgagtt accacagagttataccgagggaatgaagcatgtagaaagtaatggggtatatagatcagggtccgaaggtgaggaaatgc aatcagattacgacgatgaccagtcctttgatgggtcagaatctagtcacgacacaagctctctctccatcaaacaggaa aatcatgatgatgagaggggtttccatggaaacaaattatcacagcttcaacagtcagccggtacgggtctacatcagcc attacacattccccatttcccccatcctctggccatgcattattttcccatgaattcacattttctgcagcagacggctc ggtatcagcagcaccagcatcaacaactttctcctccagacgaccaccataaaacaggccttagtgattctcatttacac tctaactctcaccaccgaaaaagacgcacccgagtttttatcgaccctatgtcagagattccaaagttggaaaagtggtt tgcagaggatacgcatccatcatcatacatgatagacaagtactgtgaagaactgaatcgctcagaatatcgccaaaaat ttcccaaacttgaggccaaaaatgtgcagctatggttcaagaatcatcgagctaaggtcaaacgaatgaaagtttcatct gttgatctgcacaatgactcagtggcagcacccacagcaaaacaccgaaataaatcacgcaaaaacagagatgtcacgca caacacgagacgaaaaagggacaatgagcaccaagaacaacacagaaacatcaaacacagaagaccacacataaaccaac gagaccaatgggcaattggtgccgacttaggacgcccatctgccactataccagagaacacagccccacaaaactggaca gataacacagttcgttgtgcagttttctccctattgaaggagatgagtcagtcgtcgttggccaaacagtgtcctcttac acagtcagcaatatctaacatagctaactggaaatatgacagtaaactgagcaaggagaagtgtaaagagttcggagaat ggtatgcccaattcattactcagaaagaattcaaagatggaattgaagctgttccgaaagactctcggttaacattccac ccacagcacgagatacccacgatgcgtcagtggtacaccggatgtaaggcgccgacagacgacaaactcagattctacgc tgctgaactaaacaaagggcacgtgcgacaagaacgtccaaaagtaacagtagcaaaacttaaaatttggtggaagaatg aacgacaaagagaaaaaaggaacaaggacaaaaaagactcggataaaaatagtgtgagaacatgtttcgatcaacccaca gtaaatcttaatgacgagccatccacgagtgcttcgcttaactcagagacacaatcattttctcatgaaagtataacttc atacctgaatttgtaa |
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Protein
| Protein ID | pfu_aug2.0_492.1_07593.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07593.t1 MDFHAAMETFAEAWVAANTQTAVNSDPQAVKSTSSEELPTLLPKDQLTSKSTEHQQQPPGQTQHSPPVGAGVKSLPIHCV IEQTTGPLTFEADSSGSSNIELDSYAILPSSTLFSELVRTSLVKLGYSATETINAKGAIQIKNWKPLSFDIITSDKNASL DDILGELTQVATLRIRLCSQTKVSSAEEIKGKLLQLLLTQSQDLLLKAGCPIEKSLLSSISMGEHLTHLPSEIRKSFDKW YREELLKSQKLIENSVTVPEASPDKHRMVKTPPSDPLPNSQSPSSMYMPLVGKTRMRTSFDPEHEIPRLQKWFQENQHPP RELMIRYLDELNSLDSRKGRRPLDLTNIIYWFKNARAAHRRASRCFEGDGGFEMEESQDLSPSGSDTNHSFLNKHPLYML PYAYAGMYGSHDMSCDMKEPCDLSQGSKTRNKDASPVEEEKKGESKVLNQIKSDEGKASVNEEMDIKKENEEIEKDDTKG SELSPKHSDASMPVLPNKNAVYVLPYPYHGKDQERNDGSQEDRKPCDLTNSNKSKSSQNESLWKKEVGAHDKENRICIEN SHRMDEEDELIHNGGIETSKGVLSDELPQSYTEGMKHVESNGVYRSGSEGEEMQSDYDDDQSFDGSESSHDTSSLSIKQE NHDDERGFHGNKLSQLQQSAGTGLHQPLHIPHFPHPLAMHYFPMNSHFLQQTARYQQHQHQQLSPPDDHHKTGLSDSHLH SNSHHRKRRTRVFIDPMSEIPKLEKWFAEDTHPSSYMIDKYCEELNRSEYRQKFPKLEAKNVQLWFKNHRAKVKRMKVSS VDLHNDSVAAPTAKHRNKSRKNRDVTHNTRRKRDNEHQEQHRNIKHRRPHINQRDQWAIGADLGRPSATIPENTAPQNWT DNTVRCAVFSLLKEMSQSSLAKQCPLTQSAISNIANWKYDSKLSKEKCKEFGEWYAQFITQKEFKDGIEAVPKDSRLTFH PQHEIPTMRQWYTGCKAPTDDKLRFYAAELNKGHVRQERPKVTVAKLKIWWKNERQREKRNKDKKDSDKNSVRTCFDQPT VNLNDEPSTSASLNSETQSFSHESITSYLNL |
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