Gene
| Gene Model ID | pfu_aug2.0_492.1_07594 |
|---|---|
| Locus | scaffold492.1 : 258590 ... 295655 : + |
| To GenomeBrowser | scaffold492.1:258590..295655 |
| Genes list of scaffold | scaffold492.1 |
| Synonym | pfu_aug1.0_169962.1_71959 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane 9 superfamily member 1-like | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_492.1_07594.t1 | 3 | 1 | EMP70 | 4 | 31 | 0.0 | 166.5 | 0.01 | 31.0 | 2.8 |
| pfu_aug2.0_492.1_07594.t1 | 3 | 2 | EMP70 | 93 | 223 | 0.0 | 166.5 | 3.7e-22 | 1.1e-18 | 67.0 |
| pfu_aug2.0_492.1_07594.t1 | 3 | 3 | EMP70 | 253 | 343 | 0.0 | 166.5 | 2.3e-31 | 6.8e-28 | 97.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_492.1_07594.t1 | gi|524908579|ref|XP_005109383.1| | PREDICTED: transmembrane 9 superfamily member 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_492.1_07594.t1 | gi|676451183|ref|XP_009052622.1| | hypothetical protein LOTGIDRAFT_174735 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_492.1_07594.t1 | gi|260804433|ref|XP_002597092.1| | hypothetical protein BRAFLDRAFT_105034 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_492.1_07594.t1 | gi|189217824|ref|NP_001121353.1| | transmembrane 9 superfamily member 1 [Xenopus laevis] | 0.0 |
| pfu_aug2.0_492.1_07594.t1 | gi|390334889|ref|XP_787683.3| | PREDICTED: transmembrane 9 superfamily member 1 [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_492.1_07594.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07594.t1 atggctctctcactatacgaaatcaacttcaaaaaggaagtagagaagaaagaactatgtaaggggtccttcacagatag tgacctaaataaactattttacacaaaatcttttattttatttgtagaggaagtagagaagagagagctttgtaaggtgt ccttcactgatagtgaccttaataaactattttacacaaaatcttttatttcatttgtagaggaagtagagaagaaagag ctatgtaaggtgtccttcacagaacgtgacctagataagctattttacacaaaatcttttattttatttgtagaggaagt agagaagaaagagctatgtaaggtgtccttcacagatagtgaccttcaacttctcagggatgccatagaagatctctact actttgagtttgttatagatgatataccagttcgtggattcattggtcacttagaggagggagggtttcttcctcacaac cataaggtgtacctctgggcacacctcaactttaacatagaatacaatggggaccagataatatttgccaacgtgacgac taaagagcacgctccagttagccttgatggggtgactgcaccacacgaagtggcattcacgtacagtataaagtggatca aatcaaatatgcgatatgaagagagagggaaacgagtcagagataatagtttttttccgaagacattagagccactgcac agaatttcacgaaacctgacaggaagcaagtactcaaggtactctaccaaactggccacttacagcccttcatcagcaac tcagatccattggttgtcaataatcaactccatggtgctggtttttctgctaattggatttgtcgttattattctgacta gagtacttaaaagtgattttgccagatacaacatggatgaagacgagagtgaagacttagattctgaggaaaacggctgg aaaataatacacacggacgttttcagattccctcccatgaagagtctcttctgtgcaattctaggcatgttaaaattttt cattagacctgctagttgtgttctcacacacagaaaaatttga |
|
Protein
| Protein ID | pfu_aug2.0_492.1_07594.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_492.1_07594.t1 MALSLYEINFKKEVEKKELCKGSFTDSDLNKLFYTKSFILFVEEVEKRELCKVSFTDSDLNKLFYTKSFISFVEEVEKKE LCKVSFTERDLDKLFYTKSFILFVEEVEKKELCKVSFTDSDLQLLRDAIEDLYYFEFVIDDIPVRGFIGHLEEGGFLPHN HKVYLWAHLNFNIEYNGDQIIFANVTTKEHAPVSLDGVTAPHEVAFTYSIKWIKSNMRYEERGKRVRDNSFFPKTLEPLH RISRNLTGSKYSRYSTKLATYSPSSATQIHWLSIINSMVLVFLLIGFVVIILTRVLKSDFARYNMDEDESEDLDSEENGW KIIHTDVFRFPPMKSLFCAILGMLKFFIRPASCVLTHRKI |
|