Gene
| Gene Model ID | pfu_aug2.0_494.1_14222 |
|---|---|
| Locus | scaffold494.1 : 135293 ... 155565 : - |
| To GenomeBrowser | scaffold494.1:135293..155565 |
| Genes list of scaffold | scaffold494.1 |
| Synonym | pfu_aug1.0_7130.1_38464 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_494.1_14222.t1 | 17 | 1 | zf-H2C2_2 | 409 | 421 | 5.5e-06 | 26.4 | 0.02 | 42.0 | 4.6 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 1 | zf-C2H2 | 410 | 433 | 6.6e-22 | 76.4 | 0.0013 | 2.8 | 8.4 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 1 | zf-C2H2_4 | 410 | 432 | 6.8e-08 | 32.3 | 0.087 | 180.0 | 2.7 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 1 | zf-C2H2_jaz | 410 | 428 | 3.3e-06 | 27.0 | 0.092 | 190.0 | 2.3 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 2 | zf-H2C2_2 | 424 | 434 | 5.5e-06 | 26.4 | 1.8 | 3900.0 | -1.6 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 3 | zf-H2C2_2 | 536 | 548 | 5.5e-06 | 26.4 | 0.71 | 1500.0 | -0.3 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 2 | zf-C2H2 | 541 | 564 | 6.6e-22 | 76.4 | 0.0026 | 5.4 | 7.5 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 2 | zf-C2H2_4 | 541 | 564 | 6.8e-08 | 32.3 | 0.13 | 280.0 | 2.2 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 2 | zf-C2H2_jaz | 546 | 560 | 3.3e-06 | 27.0 | 6.2 | 13000.0 | -3.5 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 4 | zf-H2C2_2 | 556 | 565 | 5.5e-06 | 26.4 | 0.83 | 1800.0 | -0.5 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 5 | zf-H2C2_2 | 621 | 634 | 5.5e-06 | 26.4 | 0.0056 | 12.0 | 6.4 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 3 | zf-C2H2_jaz | 623 | 634 | 3.3e-06 | 27.0 | 0.021 | 44.0 | 4.3 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 3 | zf-C2H2 | 624 | 647 | 6.6e-22 | 76.4 | 0.00056 | 1.2 | 9.6 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 3 | zf-C2H2_4 | 625 | 647 | 6.8e-08 | 32.3 | 0.0021 | 4.4 | 7.8 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 6 | zf-H2C2_2 | 642 | 652 | 5.5e-06 | 26.4 | 7.0 | 15000.0 | -3.6 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 7 | zf-H2C2_2 | 815 | 827 | 5.5e-06 | 26.4 | 4.6 | 9800.0 | -2.8 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 4 | zf-C2H2 | 817 | 838 | 6.6e-22 | 76.4 | 0.13 | 280.0 | 2.1 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 4 | zf-C2H2_jaz | 817 | 827 | 3.3e-06 | 27.0 | 2.6 | 5500.0 | -2.3 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 4 | zf-C2H2_4 | 819 | 837 | 6.8e-08 | 32.3 | 0.11 | 220.0 | 2.5 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 8 | zf-H2C2_2 | 858 | 879 | 5.5e-06 | 26.4 | 0.25 | 530.0 | 1.2 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 5 | zf-C2H2 | 870 | 879 | 6.6e-22 | 76.4 | 0.79 | 1700.0 | -0.3 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 5 | zf-C2H2_4 | 870 | 889 | 6.8e-08 | 32.3 | 0.28 | 600.0 | 1.1 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 5 | zf-C2H2_jaz | 870 | 879 | 3.3e-06 | 27.0 | 1.1 | 2300.0 | -1.1 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 6 | zf-C2H2 | 901 | 924 | 6.6e-22 | 76.4 | 0.00013 | 0.28 | 11.6 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 6 | zf-C2H2_4 | 901 | 921 | 6.8e-08 | 32.3 | 0.00037 | 0.78 | 10.2 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 9 | zf-H2C2_2 | 901 | 909 | 5.5e-06 | 26.4 | 0.11 | 230.0 | 2.3 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 6 | zf-C2H2_jaz | 902 | 921 | 3.3e-06 | 27.0 | 4.6e-05 | 0.097 | 12.8 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 7 | zf-C2H2 | 957 | 976 | 6.6e-22 | 76.4 | 7.3e-05 | 0.16 | 12.4 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 7 | zf-C2H2_4 | 957 | 976 | 6.8e-08 | 32.3 | 0.002 | 4.1 | 7.9 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 7 | zf-C2H2_jaz | 957 | 975 | 3.3e-06 | 27.0 | 0.00075 | 1.6 | 8.9 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 10 | zf-H2C2_2 | 957 | 965 | 5.5e-06 | 26.4 | 2.9 | 6100.0 | -2.2 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 8 | zf-C2H2 | 1003 | 1017 | 6.6e-22 | 76.4 | 0.23 | 490.0 | 1.4 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 8 | zf-C2H2_4 | 1003 | 1017 | 6.8e-08 | 32.3 | 0.96 | 2000.0 | -0.5 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 11 | zf-H2C2_2 | 1009 | 1033 | 5.5e-06 | 26.4 | 0.00021 | 0.44 | 10.9 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 9 | zf-C2H2 | 1023 | 1046 | 6.6e-22 | 76.4 | 6.3e-06 | 0.013 | 15.7 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 9 | zf-C2H2_4 | 1023 | 1044 | 6.8e-08 | 32.3 | 0.00029 | 0.61 | 10.5 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 8 | zf-C2H2_jaz | 1023 | 1043 | 3.3e-06 | 27.0 | 0.01 | 22.0 | 5.3 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 12 | zf-H2C2_2 | 1038 | 1065 | 5.5e-06 | 26.4 | 0.04 | 86.0 | 3.7 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 10 | zf-C2H2 | 1058 | 1080 | 6.6e-22 | 76.4 | 0.00032 | 0.67 | 10.4 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 10 | zf-C2H2_4 | 1058 | 1078 | 6.8e-08 | 32.3 | 0.054 | 110.0 | 3.4 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 9 | zf-C2H2_jaz | 1058 | 1077 | 3.3e-06 | 27.0 | 0.015 | 32.0 | 4.8 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 13 | zf-H2C2_2 | 1074 | 1096 | 5.5e-06 | 26.4 | 8.7e-07 | 0.0018 | 18.4 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 11 | zf-C2H2 | 1086 | 1108 | 6.6e-22 | 76.4 | 0.0025 | 5.2 | 7.6 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 11 | zf-C2H2_4 | 1086 | 1109 | 6.8e-08 | 32.3 | 0.00067 | 1.4 | 9.4 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 14 | zf-H2C2_2 | 1100 | 1124 | 5.5e-06 | 26.4 | 2.3e-07 | 0.00048 | 20.2 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 12 | zf-C2H2 | 1115 | 1137 | 6.6e-22 | 76.4 | 1.3e-07 | 0.00027 | 21.1 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 12 | zf-C2H2_4 | 1115 | 1137 | 6.8e-08 | 32.3 | 7.5e-06 | 0.016 | 15.5 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 10 | zf-C2H2_jaz | 1115 | 1137 | 3.3e-06 | 27.0 | 6.0e-06 | 0.013 | 15.6 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 15 | zf-H2C2_2 | 1130 | 1164 | 5.5e-06 | 26.4 | 5.1e-06 | 0.011 | 16.0 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 13 | zf-C2H2 | 1154 | 1176 | 6.6e-22 | 76.4 | 2.0e-08 | 4.3e-05 | 23.5 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 13 | zf-C2H2_4 | 1154 | 1176 | 6.8e-08 | 32.3 | 0.00015 | 0.33 | 11.3 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 11 | zf-C2H2_jaz | 1154 | 1172 | 3.3e-06 | 27.0 | 0.0012 | 2.5 | 8.3 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 16 | zf-H2C2_2 | 1176 | 1188 | 5.5e-06 | 26.4 | 1.0 | 2100.0 | -0.8 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 14 | zf-C2H2 | 1182 | 1204 | 6.6e-22 | 76.4 | 0.00016 | 0.35 | 11.3 |
| pfu_aug2.0_494.1_14222.t1 | 14 | 14 | zf-C2H2_4 | 1182 | 1204 | 6.8e-08 | 32.3 | 0.0015 | 3.3 | 8.2 |
| pfu_aug2.0_494.1_14222.t1 | 12 | 12 | zf-C2H2_jaz | 1182 | 1201 | 3.3e-06 | 27.0 | 0.06 | 130.0 | 2.9 |
| pfu_aug2.0_494.1_14222.t1 | 17 | 17 | zf-H2C2_2 | 1196 | 1205 | 5.5e-06 | 26.4 | 7.0 | 15000.0 | -4.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_494.1_14222.t1 | gi|597747054|ref|XP_007235524.1| | PREDICTED: zinc finger protein 850-like isoform X1 [Astyanax mexicanus] | 1.0e-25 |
| pfu_aug2.0_494.1_14222.t1 | gi|688550406|ref|XP_009299002.1| | PREDICTED: gastrula zinc finger protein XlCGF57.1-like [Danio rerio] | 5.0e-25 |
| pfu_aug2.0_494.1_14222.t1 | gi|554805935|ref|XP_005913906.1| | PREDICTED: zinc finger protein 235-like [Haplochromis burtoni] | 9.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_494.1_14222.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_494.1_14222.t1 atggagactgatacagatggaaacgttacagaggacgacgtgaggagggacgtggtaccggcgtctaccatagcggtgga agtaccggctaatgcagtaccagatcccattatagcacagtaccagatttatatcaacactcgtacagatcaaaatggaa acgttacggaggacgacgtgaggagggacgtggtaccggcgtctaccatagcggtagaagtaccggctaatgcagtacct gatcccattatagcacagtaccagatttatatcaacacccgtacagatcaaagtgagaatgaagatgaccatggaagtgt atccacggaagaaagccatttgttgacacaagaggaatcatacataggtaagaaattggtgtcagaagcgggattgttac agagcagtgtggaaacaatacaaatgacctcagatgcagacatgccacgtagtccctccaatactcctaagtctgtaggt gatgtagttcatacagcgttaggagcatctgctgacccaggtcaaagtacctcactgcaaaagtttggtgataatccatc cgatgtctgcagtacttcaataagggacgcagactccagctttttgaagcctgacatgcaattacaagaaaaacaggctg caatggactgggttgatgacacagaaatacaggctgtcgataaatcacctcaggaatggtgtgataaactgattagattg tgtaaacttatagagagtgatggggatgaatgtagtgtcttatacttgaataaaggaacagggaaaaagagttttctaca tcagctcggaaccacaaaaggaaaaaggttcataaaggaaaatggaacgtttgccaagcagttcctttccttctgttatg gatctcccatgaagaaaataatctctgaggatgacggcagatattctaccagcattgcagaaaggaaaagaaaaccagag cgtctcaaagctgtagatagtaataaaaaggccagacttcaagatgaagtagtaacaacagacaaaaatggtgatgatga tgacgatgacgatgactccttagatgacagtgtgaatgacaggatagatgatgatattgatgaagggaaggatgattcag atgaaaaacagccagatcaggatgtaagaaaggtgggaagtacagcggagctaaaaataggaacaagatctgctcgacaa cgattacagagaggaagaaagggaatgtttgaatgcaaggagtgtgactttgtgacgaaacatccactcagcctgagaag acatcatcaggagatgcatgggtcggcacggaaaaagtcgattgaaaagatgaccactgtaaagaaggaagtggcgaccc ctgtgaaggaggggagaaacgatcaggaaacaacttcagatgttcagcagttagataaaaagaagggacaacagatttca aagaagaaaaataacgaacaggaaacacatacaaaaattgggcatttagataaaatgaaaggacaaaaaacgtcaaagaa agttgtgacggaaactcatgatgaaaagatgcatgtagaaagtgacagtcctaacacactcggaaaatgtgtggtaaata aattaacggggagtagggaatttcattgcagggactgtgagtttataacgaatcacgccatgacactacggaagcatgta aggcaaaatcacaaagaggcctggaatagatggtataatccttcaagtattacggaagaaacacgtgaggaagttaataa tgataataatgatgaagcgtcagaaggagttaggggaaaaagaaaatcggctattctatttaaagaaaaaatgatggagc taaaacagcgttctttggagaagaagaaatttatgtgttcaatttgttcccgtatgtttacgcagaggcgacttactgtt aatcatgttataaaatttcaccctggaaacaacccaaataaggtcatagtgtcacaggaggatggtgaggaagaggcagg gaagaagaagggagcttcgaagaagacagccacagacaaagaatggtcaccaaagaagataaagaaagagaagaaaggaa atgcggaagaggaagaagtgaatgaatcaaagaaagaagaaagtgatgaaaatgaagaaaatgatgatatggactatagg gaagatgaagaaaatgtggaacaacatgaggagggagaggaagaaaggaagaaatctaaaagaaattccaaattagtgaa gcctaaacccaaggagaaaaatctcactgaagaagaaaatgaagaggatactgaagaaaggacggagcctggagaggaag gagaaacgcaaaatgaagaagcaagtgttgaaagaagaagttctagggtaaaaaggaagaaaaaagatgggaacgaagat gaatcaaatttgtccagtgaagaatacgtgacatcagatcaaacaagttttttctgttacgagtgtggtactttttttac gtgcctgagaggtttaatgaagcacatggatatcacaaggcatacgggtaacccatacaagaagatcaaggaacgcaaat gtctacctatagaacatcagtcaagtatgagcaaaaaaagaacagaattcaggtgctctttgtgcaagaaagaatacatg aaagagcacaattgtattgcccatgtgctagaaggatcctgttctcctaggtatacccaaaaatgtccggtttgccgaaa gcattttttttcaaagaatctctatgaagctcatttgaaggaattcaatcatcaaagggacactggtgataaagattcag aggaaaaggagaacatgttgatagaaacaggtcagccgatacctgtcgaagatgaagtaccgcagacgaaatgtctcgag tgtggaaaagagtaccccactccggagcaattcagggcgcatgttagaataacggnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnccaatcagcatgatcagatttgctggggcgtacaggggtcgtacacggacaaaggaaacatgaagagacata gggacatgcacaaccgtggcagagatttcacgtgtgaattctgcggcaaaaactacaaaagaaaagactttcttaagttc catctgaagtacagtcacggaggtaggagcaatcctgacgaccctaattgtgtatgtgatatttgtggtaaagtcttagc cacgccaaaaagcaagtacgctcacatgaagatggcccactctgacgagaaaccgtactgctgtgagatttgtggatttc ggaccaaacagcttggaaacctgaagtaccatcataccatccaccattctgacgaaaagccgttcgagtgcgaagaatgt ggcaagacattccgggtccatcagctgttgaagaagcacatggctagtcatcttctgaagaaagggttggtaacagaggc tgctaaactaaccaagatgtacagatgccccgactgcggaaagacgtttgtcggaaagtcgaattttgagagtcaccgtt taatgcactttgataaagaattgaagtgtgccatctgtgattccagaatgaggaggaggggtactcttcgtagacattac agtcgtatccacaagttttccacggcggaaatagatgagctgactaaaaatataccaatggacaaggatctcataccggt gaaacagaataatagacgagtcaaagtagaggtcatagaagaagccggggaagacatttctgatgcagaatctgagatgg aaatagttactgatgagacactacttctggagcaagatacagcgccatctaccagtcaaccagtggagaaaactagacaa cgggattttgtccaagaggctcagacacaggtcaaagtagaggtcatagaagaagccggggaagacatttctgatgcaga atcagagatggaaatagttactgatgagacgctacttctggagcaagatacagcgccatctaccagtcaaccagtggaga aaagtatatccagacagcgggattttgtccaagaggctcaggcacaggtctcccttttgacctcgccagagactgctcct agcacactgtcattcgatcctaaccaagtacagtttgaagaagtatccgtttccgaagagtttgtagctctctcagagac tgttaccacggagacaacgtcaacaactactcaggaggcggagcctgagagtcagcagatcattctagacggcccattgg ctgacatgcttcacgagaaagtcatacgagccgtcgttaacacggatgctctctcagagactgtaacaacggagacaacg tcaacaactactcaggaggcggagcccgagagtcagcagatcattctagacggcccattggctgacatgcttcacgagaa agtcatacgagccgtcgttaacacggatgacgttttgagtgacgtattattcagtataggactgtga |
|
Protein
| Protein ID | pfu_aug2.0_494.1_14222.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_494.1_14222.t1 METDTDGNVTEDDVRRDVVPASTIAVEVPANAVPDPIIAQYQIYINTRTDQNGNVTEDDVRRDVVPASTIAVEVPANAVP DPIIAQYQIYINTRTDQSENEDDHGSVSTEESHLLTQEESYIGKKLVSEAGLLQSSVETIQMTSDADMPRSPSNTPKSVG DVVHTALGASADPGQSTSLQKFGDNPSDVCSTSIRDADSSFLKPDMQLQEKQAAMDWVDDTEIQAVDKSPQEWCDKLIRL CKLIESDGDECSVLYLNKGTGKKSFLHQLGTTKGKRFIKENGTFAKQFLSFCYGSPMKKIISEDDGRYSTSIAERKRKPE RLKAVDSNKKARLQDEVVTTDKNGDDDDDDDDSLDDSVNDRIDDDIDEGKDDSDEKQPDQDVRKVGSTAELKIGTRSARQ RLQRGRKGMFECKECDFVTKHPLSLRRHHQEMHGSARKKSIEKMTTVKKEVATPVKEGRNDQETTSDVQQLDKKKGQQIS KKKNNEQETHTKIGHLDKMKGQKTSKKVVTETHDEKMHVESDSPNTLGKCVVNKLTGSREFHCRDCEFITNHAMTLRKHV RQNHKEAWNRWYNPSSITEETREEVNNDNNDEASEGVRGKRKSAILFKEKMMELKQRSLEKKKFMCSICSRMFTQRRLTV NHVIKFHPGNNPNKVIVSQEDGEEEAGKKKGASKKTATDKEWSPKKIKKEKKGNAEEEEVNESKKEESDENEENDDMDYR EDEENVEQHEEGEEERKKSKRNSKLVKPKPKEKNLTEEENEEDTEERTEPGEEGETQNEEASVERRSSRVKRKKKDGNED ESNLSSEEYVTSDQTSFFCYECGTFFTCLRGLMKHMDITRHTGNPYKKIKERKCLPIEHQSSMSKKRTEFRCSLCKKEYM KEHNCIAHVLEGSCSPRYTQKCPVCRKHFFSKNLYEAHLKEFNHQRDTGDKDSEEKENMLIETGQPIPVEDEVPQTKCLE CGKEYPTPEQFRAHVRITXXXXXXXXXXXXNQHDQICWGVQGSYTDKGNMKRHRDMHNRGRDFTCEFCGKNYKRKDFLKF HLKYSHGGRSNPDDPNCVCDICGKVLATPKSKYAHMKMAHSDEKPYCCEICGFRTKQLGNLKYHHTIHHSDEKPFECEEC GKTFRVHQLLKKHMASHLLKKGLVTEAAKLTKMYRCPDCGKTFVGKSNFESHRLMHFDKELKCAICDSRMRRRGTLRRHY SRIHKFSTAEIDELTKNIPMDKDLIPVKQNNRRVKVEVIEEAGEDISDAESEMEIVTDETLLLEQDTAPSTSQPVEKTRQ RDFVQEAQTQVKVEVIEEAGEDISDAESEMEIVTDETLLLEQDTAPSTSQPVEKSISRQRDFVQEAQAQVSLLTSPETAP STLSFDPNQVQFEEVSVSEEFVALSETVTTETTSTTTQEAEPESQQIILDGPLADMLHEKVIRAVVNTDALSETVTTETT STTTQEAEPESQQIILDGPLADMLHEKVIRAVVNTDDVLSDVLFSIGL |
|