Gene
| Gene Model ID | pfu_aug2.0_494.1_14223 |
|---|---|
| Locus | scaffold494.1 : 158520 ... 182704 : - |
| To GenomeBrowser | scaffold494.1:158520..182704 |
| Genes list of scaffold | scaffold494.1 |
| Synonym | pfu_aug1.0_16435.1_39818 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_494.1_14223.t1 | 8 | 1 | zf-H2C2_2 | 28 | 39 | 4.8e-14 | 51.8 | 0.0022 | 4.6 | 7.7 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 1 | zf-C2H2_4 | 29 | 49 | 1.3e-15 | 56.4 | 1.3e-05 | 0.027 | 14.8 |
| pfu_aug2.0_494.1_14223.t1 | 7 | 1 | zf-C2H2 | 29 | 50 | 3.0e-13 | 49.2 | 0.00057 | 1.2 | 9.6 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 2 | zf-C2H2_4 | 61 | 81 | 1.3e-15 | 56.4 | 0.73 | 1500.0 | -0.2 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 2 | zf-H2C2_2 | 102 | 118 | 4.8e-14 | 51.8 | 0.028 | 59.0 | 4.2 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 3 | zf-C2H2_4 | 109 | 132 | 1.3e-15 | 56.4 | 2.0e-07 | 0.00041 | 20.4 |
| pfu_aug2.0_494.1_14223.t1 | 7 | 2 | zf-C2H2 | 109 | 131 | 3.0e-13 | 49.2 | 7.6e-06 | 0.016 | 15.5 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 3 | zf-H2C2_2 | 123 | 150 | 4.8e-14 | 51.8 | 2.8e-05 | 0.06 | 13.6 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 4 | zf-C2H2_4 | 143 | 165 | 1.3e-15 | 56.4 | 0.015 | 32.0 | 5.1 |
| pfu_aug2.0_494.1_14223.t1 | 7 | 3 | zf-C2H2 | 143 | 165 | 3.0e-13 | 49.2 | 0.00034 | 0.71 | 10.3 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 4 | zf-H2C2_2 | 159 | 182 | 4.8e-14 | 51.8 | 6.6e-09 | 1.4e-05 | 25.1 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 5 | zf-C2H2_4 | 171 | 189 | 1.3e-15 | 56.4 | 0.0013 | 2.8 | 8.4 |
| pfu_aug2.0_494.1_14223.t1 | 7 | 4 | zf-C2H2 | 171 | 194 | 3.0e-13 | 49.2 | 9.9e-05 | 0.21 | 12.0 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 5 | zf-H2C2_2 | 190 | 209 | 4.8e-14 | 51.8 | 5.9e-07 | 0.0012 | 18.9 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 6 | zf-C2H2_4 | 200 | 222 | 1.3e-15 | 56.4 | 1.5e-05 | 0.032 | 14.5 |
| pfu_aug2.0_494.1_14223.t1 | 7 | 5 | zf-C2H2 | 200 | 222 | 3.0e-13 | 49.2 | 0.00013 | 0.28 | 11.6 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 6 | zf-H2C2_2 | 237 | 250 | 4.8e-14 | 51.8 | 0.00041 | 0.87 | 9.9 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 7 | zf-C2H2_4 | 239 | 261 | 1.3e-15 | 56.4 | 0.00025 | 0.54 | 10.7 |
| pfu_aug2.0_494.1_14223.t1 | 7 | 6 | zf-C2H2 | 239 | 261 | 3.0e-13 | 49.2 | 3.4e-05 | 0.071 | 13.4 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 7 | zf-H2C2_2 | 266 | 277 | 4.8e-14 | 51.8 | 0.042 | 90.0 | 3.6 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 8 | zf-C2H2_4 | 267 | 289 | 1.3e-15 | 56.4 | 6.8e-06 | 0.014 | 15.6 |
| pfu_aug2.0_494.1_14223.t1 | 7 | 7 | zf-C2H2 | 267 | 289 | 3.0e-13 | 49.2 | 0.0013 | 2.7 | 8.5 |
| pfu_aug2.0_494.1_14223.t1 | 8 | 8 | zf-H2C2_2 | 282 | 290 | 4.8e-14 | 51.8 | 1.7 | 3700.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_494.1_14223.t1 | gi|528477062|ref|XP_003198361.2| | PREDICTED: gastrula zinc finger protein XlCGF8.2DB-like [Danio rerio] | 2.0e-22 |
| pfu_aug2.0_494.1_14223.t1 | gi|168823460|ref|NP_001108366.1| | uncharacterized protein LOC100141328 [Danio rerio] | 3.0e-22 |
| pfu_aug2.0_494.1_14223.t1 | gi|688549014|ref|XP_009298774.1| | PREDICTED: gastrula zinc finger protein XlCGF8.2DB [Danio rerio] | 6.0e-22 |
| pfu_aug2.0_494.1_14223.t1 | gi|688551100|ref|XP_009299112.1| | PREDICTED: uncharacterized protein LOC100141492 isoform X2 [Danio rerio] | 1.0e-21 |
| pfu_aug2.0_494.1_14223.t1 | gi|528477624|ref|XP_003198505.2| | PREDICTED: gastrula zinc finger protein XlCGF8.2DB-like [Danio rerio] | 1.0e-21 |
Transcript
| Transcript ID | pfu_aug2.0_494.1_14223.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_494.1_14223.t1 atgcaggcgacaaaacactccggtgataaggaacaggatggaaaaagggaaatgattttcatcacacggaaaaatggtca gaaatatcaatgcagtctttgtggacttccgtttaaaagcgaggagctttgtcaggcacatatcaccaaggcaacatgca tcagaaagtataaacgattatgccaactctgtaacattcatatctatgaaggtttcaacatatatagtgcccatatgcag gaacttcactgtattgatgacccctttgctgttgtaagaataccaaagctacccaatcccaaccataagaagaagcccac ggatttcatatgtgagcagtgtgggaaagcataccaaaccaaatggcacctggagtaccacgtcaaatatcaccacagag acaagagtttgactgacccagattgtacatgtgacatatgcggtaaagtacttgccacgccgtactgtaaaaaaatccac atgcgggattttcatacagacgagaaacctttctgctgtgaaatttgtggatatagggccaagaccaaaagcagcctcaa ctttcaccataacgctcagcatagcgtaaaaaaacctttcgcatgtgatgaatgtgcagaaactttcccgtcaaagcaga cctggcaacgccacaaaggtcggcacttaatcaatcgtggatccgtggaagaggcctccaagtactgcaaaatctatacg tgtaaagaatgcgaaaggaagtttgtatacaaatcggaatgggatagtcaccgtctctcacatgtgaacgtggagataaa atgtgaattttgtgaatccctgtttaagagtagaggggcagtcctgaaacattacaaaaaggttcacaaattaacgaagg aagagatgagtagatgtacagacaatatacccactgatagagaactactgaaattgaatgaagaatctattgaatctgat catgaagcaccagttgtcataaaagaagaatcaaacgttgttgaacgaactatttatctgactgtacaagatgaatttgt cacacaggatgaaatagacacggcaacgaatatccccagctgggatggatatatgtttcatgcagtttctgcaatttag |
|
Protein
| Protein ID | pfu_aug2.0_494.1_14223.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_494.1_14223.t1 MQATKHSGDKEQDGKREMIFITRKNGQKYQCSLCGLPFKSEELCQAHITKATCIRKYKRLCQLCNIHIYEGFNIYSAHMQ ELHCIDDPFAVVRIPKLPNPNHKKKPTDFICEQCGKAYQTKWHLEYHVKYHHRDKSLTDPDCTCDICGKVLATPYCKKIH MRDFHTDEKPFCCEICGYRAKTKSSLNFHHNAQHSVKKPFACDECAETFPSKQTWQRHKGRHLINRGSVEEASKYCKIYT CKECERKFVYKSEWDSHRLSHVNVEIKCEFCESLFKSRGAVLKHYKKVHKLTKEEMSRCTDNIPTDRELLKLNEESIESD HEAPVVIKEESNVVERTIYLTVQDEFVTQDEIDTATNIPSWDGYMFHAVSAI |
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