Gene
| Gene Model ID | pfu_aug2.0_494.1_14226 |
|---|---|
| Locus | scaffold494.1 : 269496 ... 273474 : - |
| To GenomeBrowser | scaffold494.1:269496..273474 |
| Genes list of scaffold | scaffold494.1 |
| Synonym | pfu_aug1.0_7256.1_38494 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_494.1_14226.t1 | 4 | 1 | zf-B_box | 25 | 49 | 2.5e-10 | 40.0 | 1.7 | 2900.0 | -1.8 |
| pfu_aug2.0_494.1_14226.t1 | 3 | 1 | zf-C3HC4 | 25 | 70 | 4.7e-07 | 29.3 | 2.8e-10 | 4.7e-07 | 29.3 |
| pfu_aug2.0_494.1_14226.t1 | 4 | 2 | zf-B_box | 67 | 71 | 2.5e-10 | 40.0 | 6.9 | 11000.0 | -3.7 |
| pfu_aug2.0_494.1_14226.t1 | 4 | 3 | zf-B_box | 107 | 155 | 2.5e-10 | 40.0 | 1.9e-08 | 3.2e-05 | 23.7 |
| pfu_aug2.0_494.1_14226.t1 | 3 | 2 | zf-C3HC4 | 111 | 144 | 4.7e-07 | 29.3 | 0.023 | 37.0 | 4.0 |
| pfu_aug2.0_494.1_14226.t1 | 4 | 4 | zf-B_box | 172 | 205 | 2.5e-10 | 40.0 | 1.3e-10 | 2.2e-07 | 30.6 |
| pfu_aug2.0_494.1_14226.t1 | 3 | 3 | zf-C3HC4 | 186 | 186 | 4.7e-07 | 29.3 | 9.0 | 15000.0 | -6.7 |
| pfu_aug2.0_494.1_14226.t1 | 4 | 1 | NHL | 391 | 414 | 2.3e-10 | 39.8 | 1.5e-07 | 0.00025 | 20.8 |
| pfu_aug2.0_494.1_14226.t1 | 2 | 1 | SGL | 392 | 436 | 5.6e-06 | 25.9 | 0.0017 | 2.9 | 7.2 |
| pfu_aug2.0_494.1_14226.t1 | 4 | 2 | NHL | 429 | 445 | 2.3e-10 | 39.8 | 2.5 | 4100.0 | -2.0 |
| pfu_aug2.0_494.1_14226.t1 | 4 | 3 | NHL | 474 | 485 | 2.3e-10 | 39.8 | 8.9 | 15000.0 | -3.7 |
| pfu_aug2.0_494.1_14226.t1 | 2 | 2 | SGL | 474 | 558 | 5.6e-06 | 25.9 | 2.4e-06 | 0.004 | 16.5 |
| pfu_aug2.0_494.1_14226.t1 | 4 | 4 | NHL | 526 | 550 | 2.3e-10 | 39.8 | 2.5e-06 | 0.0041 | 17.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_494.1_14226.t1 | gi|676432445|ref|XP_009046576.1| | hypothetical protein LOTGIDRAFT_137956, partial [Lottia gigantea] | 9.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_494.1_14226.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_494.1_14226.t1 atgaacggtcacagtgaaaatcacatggtcaatggcgacacagaaaacaacttaatggagcagacgatcgtctgtaacct ttgtaaggggaacttaaaatcacccaaactacttaattgtctccatagtttttgtatgtcatgtttggaggagtatatcg ttaaagctttaaaccagaatggacagcgatatttcgagtgtccatcttgtggtttggaaattgagcttccgtcgtccgct ctaccagggcagtacgcaaattctttcccagaggacacttttttgagcaaagtaatagaattaaaggatgccatgaaaga agataaaacttgtgatatttgcgaaagacttgaggaaagaatatccgctgccagtttttgtatggactgtaacgacgcta tgtgtgaaaattgtcttaaggtacatttgcacgggaagcttacttccggtcacacggttatgtccatcgcagaaatgaga aaaatgccgctagagaatattatgaagcagaaaaacaaagttccgtgtgagaagcataacgagttgataacgctcttttg cgtggactgtaaagaaccaatttgtgttcagtgtatggcggtatcgcatcgtcgatgcgaaaatgtcgtcacggtggccg atgcgatatcgtcacgttccgacgtcagcgatgtcgtcatacgacttcagaagctgcaagtatcagccgataactcaaac ggcgacagtgatgcgaacaaacttttagaagaaagcatcgagcaatctagagctaagattactgacacgtgcaatgccct atgcgagaaagttcgtcagcaacaggccgtattactcaaaagtctagatgactgcgtccttcaagccaagaaaaccttaa agggtcgattagaaccccgaaaaataggcgcaaaatccatcaagacagcgaacgaccggatgcagatgatgatggcatac ggaagtgacgtagagattttacttgcgtataaccaagtgcgcaaacaactagattcgagccaaggtgctatcagcaactc cgatccgaattcagtaagtgttaaggttgaggttgctctggacgatttggtagagaaattcatgtcggagtttgagaaga taggggaagtttcgctggagatcggcggatctgacgaggggttaaactcctggggcgtcacctgtacgtcaacagatgac atcatagtaacagactgcaaaaacaagaggatccaaaagttcagcaagtttggcgatttggtagactatgtacagcttga ggacgaaccacgtgacattaccacgtgtggtaaccgtgacgacgttgccataacgatgattggtaaattaattatattct tagcaacaaggagaacaatgcagttgataaaacgcgccaagacagagcgacagtacgatggaatatgttactcgaccagg gacgccttccttgtcgttagcagtatacgggaccgagtcgtggacattgtacagctggacggaagcgccgtagttggtgt tacgcaatcaggcaagcacgtgttccagtacaaaccggaaggaagtaaagctctgaagaagccacaaggcgcatgcgtag acgtcatcggaaatttgttcgtagcggaccatggaaatgaccgtgtacaattgttgactaacgacggacattttcagagg cttgtcctagaatctgacagcggacttgaaaaacccgtagctatacgggtcagtggaagtaataggatggtcatagttca aggtgatggaatggtgaaagtgttcagttatacgtga |
|
Protein
| Protein ID | pfu_aug2.0_494.1_14226.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_494.1_14226.t1 MNGHSENHMVNGDTENNLMEQTIVCNLCKGNLKSPKLLNCLHSFCMSCLEEYIVKALNQNGQRYFECPSCGLEIELPSSA LPGQYANSFPEDTFLSKVIELKDAMKEDKTCDICERLEERISAASFCMDCNDAMCENCLKVHLHGKLTSGHTVMSIAEMR KMPLENIMKQKNKVPCEKHNELITLFCVDCKEPICVQCMAVSHRRCENVVTVADAISSRSDVSDVVIRLQKLQVSADNSN GDSDANKLLEESIEQSRAKITDTCNALCEKVRQQQAVLLKSLDDCVLQAKKTLKGRLEPRKIGAKSIKTANDRMQMMMAY GSDVEILLAYNQVRKQLDSSQGAISNSDPNSVSVKVEVALDDLVEKFMSEFEKIGEVSLEIGGSDEGLNSWGVTCTSTDD IIVTDCKNKRIQKFSKFGDLVDYVQLEDEPRDITTCGNRDDVAITMIGKLIIFLATRRTMQLIKRAKTERQYDGICYSTR DAFLVVSSIRDRVVDIVQLDGSAVVGVTQSGKHVFQYKPEGSKALKKPQGACVDVIGNLFVADHGNDRVQLLTNDGHFQR LVLESDSGLEKPVAIRVSGSNRMVIVQGDGMVKVFSYT |
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