Gene
| Gene Model ID | pfu_aug2.0_495.1_17488 |
|---|---|
| Locus | scaffold495.1 : 146766 ... 168822 : + |
| To GenomeBrowser | scaffold495.1:146766..168822 |
| Genes list of scaffold | scaffold495.1 |
| Synonym | pfu_aug1.0_7913.1_24303 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_495.1_17488.t1 | 2 | 1 | Reeler | 14 | 109 | 2.1e-13 | 50.6 | 5.8e-17 | 2.1e-13 | 50.6 |
| pfu_aug2.0_495.1_17488.t1 | 2 | 2 | Reeler | 223 | 223 | 2.1e-13 | 50.6 | 4.0 | 15000.0 | -4.7 |
| pfu_aug2.0_495.1_17488.t1 | 2 | 1 | DOMON | 293 | 389 | 4.6e-19 | 68.5 | 4.3e-14 | 1.6e-10 | 40.9 |
| pfu_aug2.0_495.1_17488.t1 | 2 | 2 | DOMON | 470 | 543 | 4.6e-19 | 68.5 | 5.4e-09 | 2.0e-05 | 24.5 |
| pfu_aug2.0_495.1_17488.t1 | 1 | 1 | Cytochrom_B561 | 585 | 719 | 9.7e-06 | 25.4 | 5.5e-09 | 2.0e-05 | 24.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_495.1_17488.t1 | gi|676496959|ref|XP_009067385.1| | hypothetical protein LOTGIDRAFT_237231 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_495.1_17488.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_495.1_17488.t1 atgacttttattccactgtacctgatgcaccatgatttgacagttagagcatgtccaggacatagctttaaaggcttcct cctccagccacgtctggcacagtttgctgaccaagacataaagattggagtctttggtcactatcccagtgcctcttacc agtatgcttgccctgatacaagattaggtactcgtggacaggctctgacccatgttgatggcacaaataaaaatgtcatg gagtttgtatggcaggctccaagagttcctcaaggccatgtcatttttcgggcaacaattgtcaaggagtatacaacatt ctgggttggagttaactcccctatagtgtatgacctctacagtcgaacacaactctctcgacaacaagctcttagcctta ccaactttttggcaccggaatgcaacatagctccaaaaccatctacgcctgtccccaaaacaactaccatcagaaccact accaccttgaaacctactacaaccacaccggtgccaaccacaccagtgccaaccacaccggtgccaactaccacaaccac tgttccaagtaccacaactactccagtgtcaacaacaaccactcaaccatccacaaccactaccacttccactactactg ttcctactaccactccaaccaccacattgcctaccaccacaactaccactgaaaggtcaacaactaccaagcagccatca actacctcaaccacatttgcgccgaccacaaccactcagcaaccaacaactaccagtgaagttactacaaagtctccagt tccacagggtccatacattccccttgacccagagtgtaacaagacgaaggggtgctactctgactgtgactcctcccagt gtcgttttctcatcagttggacagatagcggacaatacgtagacatggagataaaagctgacttagatataccgggagac agatggatagctgttggcttctcatatgatcgtcatatgggcagcgacagtgtgacagagtgtatcacaaacaaaggaaa ggtcaacgtatttcagtcctataacctggacactcatgctaactccagactccgaaatccaaaactaggattgtccaatg aggctgggtcctatgtggatggcatattccagtgtagattccgaagatggacaccaccaatatggacacctaaaccgaca ccgtttgtgcctgaaccaatcacatggattagaacaacagcgccaaccactcaactgttaaccacaaccatgttaaccac tactgctaggatccctgtgataaatgtgactggttcaccacagtcccagagtgtacacaaggatcatgcatgtggtgtga ccaaaggctgttatactaaatgtaacagagaggaatgtgaattcattgtttcctggcatgacatgggaaatgccgttaat ttcgaaatcaagaaaatgtttccgcctaatgaccaaagagacagatggtccaaacttggcttgagcaacatgcagggaag ttatgtagatggagtgttcacatgcaaatttacaagaaaaaagaaattaccagatgaaaagaaactctttgatctagatc aagattttcacctgatgtttgctcatggaattgcagagaacggattcaagcaaagacacagtgtgcaatctctgccctta gtttcgtcagagttagtggacctacagagacacatagtaatccatggaagggccacatacttcctggtcaaagttcatgg ctgtatgatgatacttgcatggatatgttttgctagtattggtattgtgtcagtgaggtactacaaggctatctggccac agagaacgtgcttacgggagaggatctggtaccaggctcacaaattctgtatgatccttctgttttcatcagtcgtcatt ggctttgtgttgatatttgtggacatcaaaggttacagtaagattgatggaaaaactttccaccaagcacatcctataat gggaatgttagtagtcttccttactgtggcaaatccattgatagctatatttagacctctgccagggacggtaaaaagga agatatgtaactggatacattggggaataggaacaggggctcattgtctggccatcgtgacaatatttgctggagtagag ttagctaaagctaatgcccctcccttcatcaagtacatacttatagcctatgtgtgctaccagctacttctattttgttt cttggaaattcataaatttgtgtctaacagagcagagggtaaacatgatggaacatatagttatgagatgcacaggaagc cttattatgccagtatggcacgtaccttggagatggaaccaccgttcagtggagtaaagaaggctctttatggaatccat attttgattatctcagcttttacccttgtattgactgttacacttatcctgagtgactga |
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Protein
| Protein ID | pfu_aug2.0_495.1_17488.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_495.1_17488.t1 MTFIPLYLMHHDLTVRACPGHSFKGFLLQPRLAQFADQDIKIGVFGHYPSASYQYACPDTRLGTRGQALTHVDGTNKNVM EFVWQAPRVPQGHVIFRATIVKEYTTFWVGVNSPIVYDLYSRTQLSRQQALSLTNFLAPECNIAPKPSTPVPKTTTIRTT TTLKPTTTTPVPTTPVPTTPVPTTTTTVPSTTTTPVSTTTTQPSTTTTTSTTTVPTTTPTTTLPTTTTTTERSTTTKQPS TTSTTFAPTTTTQQPTTTSEVTTKSPVPQGPYIPLDPECNKTKGCYSDCDSSQCRFLISWTDSGQYVDMEIKADLDIPGD RWIAVGFSYDRHMGSDSVTECITNKGKVNVFQSYNLDTHANSRLRNPKLGLSNEAGSYVDGIFQCRFRRWTPPIWTPKPT PFVPEPITWIRTTAPTTQLLTTTMLTTTARIPVINVTGSPQSQSVHKDHACGVTKGCYTKCNREECEFIVSWHDMGNAVN FEIKKMFPPNDQRDRWSKLGLSNMQGSYVDGVFTCKFTRKKKLPDEKKLFDLDQDFHLMFAHGIAENGFKQRHSVQSLPL VSSELVDLQRHIVIHGRATYFLVKVHGCMMILAWICFASIGIVSVRYYKAIWPQRTCLRERIWYQAHKFCMILLFSSVVI GFVLIFVDIKGYSKIDGKTFHQAHPIMGMLVVFLTVANPLIAIFRPLPGTVKRKICNWIHWGIGTGAHCLAIVTIFAGVE LAKANAPPFIKYILIAYVCYQLLLFCFLEIHKFVSNRAEGKHDGTYSYEMHRKPYYASMARTLEMEPPFSGVKKALYGIH ILIISAFTLVLTVTLILSD |
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