Gene
| Gene Model ID | pfu_aug2.0_495.1_17491 |
|---|---|
| Locus | scaffold495.1 : 202051 ... 218357 : + |
| To GenomeBrowser | scaffold495.1:202051..218357 |
| Genes list of scaffold | scaffold495.1 |
| Synonym | pfu_aug1.0_19715.1_11254 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_495.1_17491.t2 | 11 | 1 | MORN | 70 | 91 | 3.9937e-43 | 142.6 | 0.00031 | 2.3 | 8.1 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 2 | MORN | 93 | 113 | 3.9937e-43 | 142.6 | 1.6e-06 | 0.012 | 15.3 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 3 | MORN | 116 | 138 | 3.9937e-43 | 142.6 | 8.8e-08 | 0.00065 | 19.2 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 4 | MORN | 139 | 159 | 3.9937e-43 | 142.6 | 9.4e-09 | 7.0e-05 | 22.3 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 5 | MORN | 163 | 181 | 3.9937e-43 | 142.6 | 3.3e-06 | 0.024 | 14.3 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 6 | MORN | 188 | 210 | 3.9937e-43 | 142.6 | 8.9e-11 | 6.6e-07 | 28.6 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 7 | MORN | 211 | 228 | 3.9937e-43 | 142.6 | 6.8e-08 | 0.00051 | 19.6 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 8 | MORN | 235 | 252 | 3.9937e-43 | 142.6 | 6.9e-05 | 0.51 | 10.1 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 9 | MORN | 268 | 290 | 3.9937e-43 | 142.6 | 1.7e-09 | 1.2e-05 | 24.6 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 10 | MORN | 291 | 311 | 3.9937e-43 | 142.6 | 1.4e-11 | 1.1e-07 | 31.1 |
| pfu_aug2.0_495.1_17491.t2 | 11 | 11 | MORN | 314 | 320 | 3.9937e-43 | 142.6 | 1.5 | 11000.0 | -3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_495.1_17491.t2 | gi|530635780|ref|XP_005304748.1| | PREDICTED: radial spoke head 10 homolog B isoform X1 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_495.1_17491.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_495.1_17491.t1 atggcaacgaagggtaagaaaggtagcgcgaaaacgagcgcaaagaaaagtgagggatctattgtagaggatgacaagaa ggaagaatcgatcgctcttgatacagagtcgaccagaacagaggaacctgtggttgagcctgtcaaggagccgacacctg aacctgtctatgaagaaccaccattaaatgaactgatcattgaaagttatgaaggggagaaggccaaaggattgtatgag ggggagggtgtggcatacttcactggaggacacatgtacaagggaatgttttgtgaaggcttcatgcatggcagaggact ttataagtgggcagatggagtggaatatgagggagaattatatcaaaatcatgtgactggcaagggagtatatagatggc cagatggaagtacttacgaaggtgatgtcctagatggtaagagacatggacaaggcgtgtttaggtgtaagaatggtgtc ctgtcatacagtggagactggtgtatgggaaaacgtcatggaaagggcaaaatggagtatgacagtgcagggaggtccta ttatgatggagactgggtgaacaatgtaaaacatggatatggtaaacgacagtatccctccggcaatgtgtatgagggca tgtggttcaacaacgtcaggcatggagagggtaccatgaaatggttagatagacaccagatgtatacaggaaactgggaa aatggtatacagaatggcttgggtcagcatatttggatgttacggagagtaacaggttctcagtatccattacgtaacac ctacgatggagactttgtcagtggactcagacatggaaacggctcattccattatgccaatggagctagatacgaggggg aatggaggaataacatgaagcatggaaaaggaaaattcatattcaagaatggtcgtatttatgaggggatgtttgagaag gatcacatcgtagagtttccagacttcgctatggatggtaccacaacacctgacatcacccagatcagaaccaggactcc actgccttgtgataatgtatcagttcatagcaatgagagtaggaatactatagggccgagctttacattagagatagatc acttactgaacgagttcacagagactgatagggaggaggaggccagacaggttttgaatgtcgttatgaggcacattaca acactgcggaggatctataattactacagtaaccttggttatgacgaaagtgccgacaatacgtatgtgatgaacaagat gcagttctggagatttctgaaggattgtaagctccatcataatgagataacactgatggatatggaccgacatcttggac caaataagacaaagtttgagcttcataatccgtatgagaagattttacagcgacagtttatcaacaatctagttattgtg gcttaccatatctaccatgaagaacatgaggagacaactccagttttacaatggtgcatgtctaagttgatccaagacaa tatcttacgctatgcctgtaatgtacaaggacattattactatgaccccaggagagctagaaatgccctagtccatcaag atcaagcttatgatgtataccaggctatgactaatcaaagaaagcttgcaccacatgatccctccatgaaaatgagagaa tttctttacatgatgaaggacctgaagttgataaataatgatctgacacctaaagctatcctggacgtgctgtctagtga cgatcctaacgtggctgatggagagggatgttgtaacatggaacttgagatgacattcctggagtttttcgagggtctga ttggctgtgccgaggtttttgccacagaagctgtaattaaagacccgtccaccccacgtccaagtaccgttatatccgag catgaacagagcatgtactctatgccagtatctaggattgctagccaggtctctttcatggcttctagtaaaaaattatt acatgttgggttggatggaggtgagtcccagccccctgggtcccctagacagggaacagtatcccccgagtcacagtccc ccactagggcagtgtcttcagcagaggggaccaataaaacaggggacaatactgctggtacaaaggctcccgaagttcaa cagtctacatccaatgttacaggaggttctcagaatggagatcacactgctacactcagtaggcgggaatccacgaaaga tgttaaagatttagctgagcatcagaagagtggttccttcatcagtaaccacacctctgccacagaggagggtcaggtgc tcctgcagagctctgtgtctataggaggtcatacaggggcaggaactgagggcgaggaggaagaggaagaagctaccaaa ggtgttgatatcacagaaccagatgagaaagaagaggaactagatgaaactactagacagttcaatttctggactcatca aatccacatattcttcttccgaaaatttttccctgcggcagaaaggttcgaacagataaggaaaagaatagaaaccaaca agctagaggaagcaaaagaaaaagccaaatctcctttagctatggcttcaaatggattgaatggggagatgaaactaacg ctgtaa |
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| Transcript ID | pfu_aug2.0_495.1_17491.t2 |
| Definition | - |
>pfu_aug2.0_495.1_17491.t2 atggcaacgaagggtaagaaaggtagcgcgaaaacgagcgcaaagaaaagtgagggatctattgtagaggatgacaagaa ggaagaatcgatcgctcttgatacagagtcgaccagaacagaggaacctgtggttgagcctgtcaaggagccgacacctg aacctgtctatgaagaaccaccattaaatgaactgatcattgaaagttatgaaggggagaaggccaaaggattgtatgag ggggagggtgtggcatacttcactggaggacacatgtacaagggaatgttttgtgaaggcttcatgcatggcagaggact ttataagtgggcagatggagtggaatatgagggagaattatatcaaaatcatgtgactggcaagggagtatatagatggc cagatggaagtacttacgaaggtgatgtcctagatggtaagagacatggacaaggcgtgtttaggtgtaagaatggtgtc ctgtcatacagtggagactggtgtatgggaaaacgtcatggaaagggcaaaatggagtatgacagtgcagggaggtccta ttatgatggagactgggtgaacaatgtaaaacatggatatggtaaacgacagtatccctccggcaatgtgtatgagggca tgtggttcaacaacgtcaggcatggagagggtaccatgaaatggttagatagacaccagatgtatacaggaaactgggaa aatggtatacagaatggcttgggtcagcatatttggatgttacggagagtaacaggttctcagtatccattacgtaacac ctacgatggagactttgtcagtggactcagacatggaaacggctcattccattatgccaatggagctagatacgaggggg aatggaggaataacatgaagcatggaaaaggaaaattcatattcaagaatggtcgtatttatgaggggatgtttgagaag gatcacatcgtagagtttccagacttcgctatggatggtaccacaacacctgacatcacccagatcagaaccaggactcc actgccttgtgataatgtatcagttcatagcaatgagagtaggaatactatagggccgagctttacattagagatagatc acttactgaacgagttcacagagactgatagggaggaggaggccagacaggttttgaatgtcgttatgaggcacattaca acactgcggaggatctataattactacagtaaccttggttatgacgaaagtgccgacaatacgtatgtgatgaacaagat gcagttctggagatttctgaaggattgtaagctccatcataatgagataacactgatggatatggaccgacatcttggac caaataagacaaagtttgagcttcataatccgtatgagaagattttacagcgacagtttatcaacaatctagttattgtg gcttaccatatctaccatgaagaacatgaggagacaactccagttttacaatggtgcatgtctaagttgatccaagacaa tatcttacgctatgcctgtaatgtacaaggacattattactatgaccccaggagagctagaaatgccctagtccatcaag atcaagcttatgatgtataccaggctatgactaatcaaagaaagcttgcaccacatgatccctccatgaaaatgagagaa tttctttacatgatgaaggacctgaagttgataaataatgatctgacacctaaagctatcctggacgtgctgtctagtga cgatcctaacgtggctgatggagagggatgttgtaacatggaacttgagatgacattcctggagtttttcgagggtctga ttggctgtgccgaggtttttgccacagaagctgtaattaaagacccgtccaccccacgtccaagtaccgttatatccgag catgaacagagcatgtactctatgccagtatctaggattgctagccagtctcagacaaagagcagtgctggaagtcctat atctgaagtaaccagactaagtttgcttagtgcaactaccggcaatggggtctctttcatggcttctagtaaaaaattat tacatgttgggttggatggaggtgagtcccagccccctgggtcccctagacagggaacagtatcccccgagtcacagtcc cccactagggcagtgtcttcagcagaggggaccaataaaacaggggacaatactgctggtacaaaggctcccgaagttca acagtctacatccaatgttacaggaggttctcagaatggagatcacactgctacactcagtaggcgggaatccacgaaag atgttaaagatttagctgagcatcagaagagtggttccttcatcagtaaccacacctctgccacagaggagggtcaggtg ctcctgcagagctctgtgtctataggaggtcatacaggggcaggaactgagggcgaggaggaagaggaagaagctaccaa aggtgttgatatcacagaaccagatgagaaagaagaggaactagatgaaactactagacagttcaatttctggactcatc aaatccacatattcttcttccgaaaatttttccctgcggcagaaaggttcgaacagataaggaaaagaatagaaaccaac aagctagaggaagcaaaagaaaaagccaaatctcctttagctatggcttcaaatggattgaatggggagatgaaactaac gctgtaa |
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Protein
| Protein ID | pfu_aug2.0_495.1_17491.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_495.1_17491.t1 MATKGKKGSAKTSAKKSEGSIVEDDKKEESIALDTESTRTEEPVVEPVKEPTPEPVYEEPPLNELIIESYEGEKAKGLYE GEGVAYFTGGHMYKGMFCEGFMHGRGLYKWADGVEYEGELYQNHVTGKGVYRWPDGSTYEGDVLDGKRHGQGVFRCKNGV LSYSGDWCMGKRHGKGKMEYDSAGRSYYDGDWVNNVKHGYGKRQYPSGNVYEGMWFNNVRHGEGTMKWLDRHQMYTGNWE NGIQNGLGQHIWMLRRVTGSQYPLRNTYDGDFVSGLRHGNGSFHYANGARYEGEWRNNMKHGKGKFIFKNGRIYEGMFEK DHIVEFPDFAMDGTTTPDITQIRTRTPLPCDNVSVHSNESRNTIGPSFTLEIDHLLNEFTETDREEEARQVLNVVMRHIT TLRRIYNYYSNLGYDESADNTYVMNKMQFWRFLKDCKLHHNEITLMDMDRHLGPNKTKFELHNPYEKILQRQFINNLVIV AYHIYHEEHEETTPVLQWCMSKLIQDNILRYACNVQGHYYYDPRRARNALVHQDQAYDVYQAMTNQRKLAPHDPSMKMRE FLYMMKDLKLINNDLTPKAILDVLSSDDPNVADGEGCCNMELEMTFLEFFEGLIGCAEVFATEAVIKDPSTPRPSTVISE HEQSMYSMPVSRIASQVSFMASSKKLLHVGLDGGESQPPGSPRQGTVSPESQSPTRAVSSAEGTNKTGDNTAGTKAPEVQ QSTSNVTGGSQNGDHTATLSRRESTKDVKDLAEHQKSGSFISNHTSATEEGQVLLQSSVSIGGHTGAGTEGEEEEEEATK GVDITEPDEKEEELDETTRQFNFWTHQIHIFFFRKFFPAAERFEQIRKRIETNKLEEAKEKAKSPLAMASNGLNGEMKLT L |
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| Protein ID | pfu_aug2.0_495.1_17491.t2 |
| Definition | - |
>pfu_aug2.0_495.1_17491.t2 MATKGKKGSAKTSAKKSEGSIVEDDKKEESIALDTESTRTEEPVVEPVKEPTPEPVYEEPPLNELIIESYEGEKAKGLYE GEGVAYFTGGHMYKGMFCEGFMHGRGLYKWADGVEYEGELYQNHVTGKGVYRWPDGSTYEGDVLDGKRHGQGVFRCKNGV LSYSGDWCMGKRHGKGKMEYDSAGRSYYDGDWVNNVKHGYGKRQYPSGNVYEGMWFNNVRHGEGTMKWLDRHQMYTGNWE NGIQNGLGQHIWMLRRVTGSQYPLRNTYDGDFVSGLRHGNGSFHYANGARYEGEWRNNMKHGKGKFIFKNGRIYEGMFEK DHIVEFPDFAMDGTTTPDITQIRTRTPLPCDNVSVHSNESRNTIGPSFTLEIDHLLNEFTETDREEEARQVLNVVMRHIT TLRRIYNYYSNLGYDESADNTYVMNKMQFWRFLKDCKLHHNEITLMDMDRHLGPNKTKFELHNPYEKILQRQFINNLVIV AYHIYHEEHEETTPVLQWCMSKLIQDNILRYACNVQGHYYYDPRRARNALVHQDQAYDVYQAMTNQRKLAPHDPSMKMRE FLYMMKDLKLINNDLTPKAILDVLSSDDPNVADGEGCCNMELEMTFLEFFEGLIGCAEVFATEAVIKDPSTPRPSTVISE HEQSMYSMPVSRIASQSQTKSSAGSPISEVTRLSLLSATTGNGVSFMASSKKLLHVGLDGGESQPPGSPRQGTVSPESQS PTRAVSSAEGTNKTGDNTAGTKAPEVQQSTSNVTGGSQNGDHTATLSRRESTKDVKDLAEHQKSGSFISNHTSATEEGQV LLQSSVSIGGHTGAGTEGEEEEEEATKGVDITEPDEKEEELDETTRQFNFWTHQIHIFFFRKFFPAAERFEQIRKRIETN KLEEAKEKAKSPLAMASNGLNGEMKLTL |
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