Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_495.1_17495
Locus scaffold495.1 : 289075 ... 304920 : -
To GenomeBrowser scaffold495.1:289075..304920
Genes list of scaffold scaffold495.1
Synonym pfu_aug1.0_3598.1_16135

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_495.1_17495.t1 1 1 Lipase 45 349 0.0 293.1 0.0 0.0 292.8
pfu_aug2.0_495.1_17495.t1 1 1 Abhydrolase_6 91 202 3.5e-06 27.0 2.2e-09 4.6e-06 26.6

Transcript
Transcript IDpfu_aug2.0_495.1_17495.t1
Definition-
>pfu_aug2.0_495.1_17495.t1
atgtggtaccttgcacttgtcatcttagtggtgtcgtcagcagaaggatggtctggatggtggtggagaagcaattgcta
tgaagatcttggtgaattcaaaactgaccctccttttaacaataccggtggttgggaacctcagtgtatccgtcacatct
ctacgacattccagttatttacaaagggacaaaccacatctccacaacttctagatctggctgattccacaaccataact
aattctcactacgacggaagcttaaaaactgtgttcattgtacacgggtatagggattcagcatcaagtcaatgggtcaa
agatatggtagccgcccttttgaaggaggaccaggaagctaagaatgtaatagcagtcgattggtcgaatggtgccgatt
cttctaactacttcatatcagctgcaaatacccgagttgttggtgccttaatagctcgtatgatgtcgcttcttcacgac
aaaactcaggctagttatggagatatgcatgtagtgggtcacagtctcggttctcatataggagggtatgctggtgaaga
aacacccggccttggtagaataacaggtttagatcctgcggggccatgctttgaggaacaagatgttatagtgaggctag
atccagatgacgcaaagtatgtcgatgtcatacacacagatggcgacagcctattggcattgggttttggctgtgacaga
ccattgggtgatgccgatttctatcctaatggtggagtagaccaaccaggatgtccgactcacataaaggatcatctctt
cagcattataacaggacaaatatcagaattgacggacggagtcggttgcagccatttgagagctctggacctgttcaccg
agtcaattacgtcatcatgtaaattccagtccgtgccatgcagcagcaaatccaagtatgataacaatcaatgtactcaa
tgtggacatggctgtgccgatatgggatattacagcagcccactaagccgtggatcattctttctcacaacctctgatgg
atcaaatggatcaccttactgtaaggcataa

Protein
Protein IDpfu_aug2.0_495.1_17495.t1
Definition-
>pfu_aug2.0_495.1_17495.t1
MWYLALVILVVSSAEGWSGWWWRSNCYEDLGEFKTDPPFNNTGGWEPQCIRHISTTFQLFTKGQTTSPQLLDLADSTTIT
NSHYDGSLKTVFIVHGYRDSASSQWVKDMVAALLKEDQEAKNVIAVDWSNGADSSNYFISAANTRVVGALIARMMSLLHD
KTQASYGDMHVVGHSLGSHIGGYAGEETPGLGRITGLDPAGPCFEEQDVIVRLDPDDAKYVDVIHTDGDSLLALGFGCDR
PLGDADFYPNGGVDQPGCPTHIKDHLFSIITGQISELTDGVGCSHLRALDLFTESITSSCKFQSVPCSSKSKYDNNQCTQ
CGHGCADMGYYSSPLSRGSFFLTTSDGSNGSPYCKA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495