Gene
| Gene Model ID | pfu_aug2.0_4957.1_26015 |
|---|---|
| Locus | scaffold4957.1 : 4925 ... 8231 : + |
| To GenomeBrowser | scaffold4957.1:4925..8231 |
| Genes list of scaffold | scaffold4957.1 |
| Synonym | pfu_aug1.0_45836.1_48604 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein partial | GO:0010468 GO:0044260 GO:0090304 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_4957.1_26015.t1 | 2 | 1 | DUF3504 | 9 | 72 | 2.4e-10 | 40.4 | 2.2e-13 | 1.1e-09 | 38.3 |
| pfu_aug2.0_4957.1_26015.t1 | 2 | 2 | DUF3504 | 109 | 128 | 2.4e-10 | 40.4 | 0.2 | 990.0 | -0.7 |
Transcript
| Transcript ID | pfu_aug2.0_4957.1_26015.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4957.1_26015.t1 atggacggacaggcagccagacgggtggacgatatgacaggtagtccaaattgtcctgtcgctagttttgagaaatatac catgaaactgaatcccaattgtgagtttatgtggcataggccgaaatcaaaggtgtcggaggaggaaaacaggtggtacg acaatatggttgttggaaaaaacactctgggacaattaatgcagaccataagcaaagaaacacatttcagcaggatttat acaaaccattcaataagagcaacttgcataacgatgctagacgaaagtggattcgaatccaggcatatcatggggatctc gaaacataaatcagagagcagtcttaagcattacgcctccaaacgtagtgataaaagaaagcgagaaatgtccgaatctt taagtcgtaagatctttctttctttctttctgttttggcacctgacaaccctctattggttcagcacgaatcataaaatt tcggaatctgtagtaattaccaaagcgcaaagaagagatgttgacctcaccatgcgggcagtttctgatacagataaaaa cactatcgattttctggatatgttaagtgatttcgatgaccctgatctagcctctgttttagacaaccctaatatctttg ggatttccgaccaagagcagtcaattgttcgggagcagtcggagattgacacagttcgccagaaagcagttattatccct ccgcagcctaaaactacgactccgatgaatcaagtccagggcgcgatggtgtacagtgtaacaattaacaatcatgcaca tgacgggatgtattga |
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Protein
| Protein ID | pfu_aug2.0_4957.1_26015.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_4957.1_26015.t1 MDGQAARRVDDMTGSPNCPVASFEKYTMKLNPNCEFMWHRPKSKVSEEENRWYDNMVVGKNTLGQLMQTISKETHFSRIY TNHSIRATCITMLDESGFESRHIMGISKHKSESSLKHYASKRSDKRKREMSESLSRKIFLSFFLFWHLTTLYWFSTNHKI SESVVITKAQRRDVDLTMRAVSDTDKNTIDFLDMLSDFDDPDLASVLDNPNIFGISDQEQSIVREQSEIDTVRQKAVIIP PQPKTTTPMNQVQGAMVYSVTINNHAHDGMY |
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