Gene
| Gene Model ID | pfu_aug2.0_498.1_27480 |
|---|---|
| Locus | scaffold498.1 : 287276 ... 298004 : + |
| To GenomeBrowser | scaffold498.1:287276..298004 |
| Genes list of scaffold | scaffold498.1 |
| Synonym | pfu_aug1.0_12549.1_32223 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_498.1_27480.t1 | 1 | 1 | Profilin | 172 | 262 | 1.5e-07 | 31.5 | 4.9e-11 | 2.4e-07 | 30.8 |
| pfu_aug2.0_498.1_27480.t1 | 2 | 1 | CBM_14 | 259 | 306 | 2.7e-14 | 52.8 | 3.7e-09 | 1.8e-05 | 24.5 |
| pfu_aug2.0_498.1_27480.t1 | 2 | 2 | CBM_14 | 320 | 365 | 2.7e-14 | 52.8 | 6.8e-12 | 3.4e-08 | 33.2 |
Transcript
| Transcript ID | pfu_aug2.0_498.1_27480.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_498.1_27480.t1 atgccgccgatacttcgagaacagatacttcagaattacctgaccaagaaagaatagaagaatcgaccgagtgtgaccct tcactgtacaccgctcctaatgagtcctaatgttaccgactccaatgatgacagtaaggatgtcacttttgatgaaaatg ttttcatggaaaatacatatatgtctgatgacgaagaggagatcgaagaaatggatggtgatgtacattccagtattgta aatgaaaatatatcaattgtatttgaaagtaatttaatggagattatcaatgcactgacatgctgtgagtgtaattgtcc tgtcgatccatcggatactgataaggagtatattggcacaatgatcaagataactgcatattgtacagatttagacactc agcaaatagttgcatttgtcgccgtgcaagttactgagaccggcagttctagtaaaatggaagtcgagggctttaaaaga tgtatggatattacattaaaaggggtgacgtcatcatgggacatctacgtagttcgaatgcttgccttatgtaatgatta cggaaatcatgacctatgtgacaaagcatgtatgataggcttagatcgaggcgaaccatggaactcagaggataatgcaa acgtcctacacttacaaggattagaaggggctaatatatcaacggctttcaaaaccaaggatttcaattcctccatattt atcgaagggcataagtacctagtggtgaaagaagacaacgcacttgcagacgagtgctatggaaaatcagacgggactta cgacatcggatgtcgctcatacgtagtttgtaatagaggaaccggtacggtcgtcaattgtccggatccaccttctgcta aaactgtctttaataacgcaacgaaaacatgcgacgacggcaccatgtggacaatggcgggactgacaggtcatgtgaac aaacattacccagacgtctggaatggatgcaaatcatattacacgtgccgaaacaagtatttctatggtcataacatctg tacgccaggtttaatatttgacgacagtcttcaaacctgcaattggccaaataatgtacctccgccatgtggaagtgcta agactgcaagtggctga |
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Protein
| Protein ID | pfu_aug2.0_498.1_27480.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_498.1_27480.t1 MPPILREQILQNYLTKKEXKNRPSVTLHCTPLLMSPNVTDSNDDSKDVTFDENVFMENTYMSDDEEEIEEMDGDVHSSIV NENISIVFESNLMEIINALTCCECNCPVDPSDTDKEYIGTMIKITAYCTDLDTQQIVAFVAVQVTETGSSSKMEVEGFKR CMDITLKGVTSSWDIYVVRMLALCNDYGNHDLCDKACMIGLDRGEPWNSEDNANVLHLQGLEGANISTAFKTKDFNSSIF IEGHKYLVVKEDNALADECYGKSDGTYDIGCRSYVVCNRGTGTVVNCPDPPSAKTVFNNATKTCDDGTMWTMAGLTGHVN KHYPDVWNGCKSYYTCRNKYFYGHNICTPGLIFDDSLQTCNWPNNVPPPCGSAKTASG |
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