Gene
| Gene Model ID | pfu_aug2.0_5.1_16666 |
|---|---|
| Locus | scaffold5.1 : 168272 ... 194335 : + |
| To GenomeBrowser | scaffold5.1:168272..194335 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | pfu_aug1.0_86828.1_63996 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5.1_16666.t1 | 1 | 1 | DTW | 62 | 314 | 8.89825e-43 | 145.8 | 0.0 | 1.3004e-42 | 145.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5.1_16666.t1 | gi|524864857|ref|XP_005089262.1| | PREDICTED: DTW domain-containing protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_5.1_16666.t1 | gi|524864859|ref|XP_005089263.1| | PREDICTED: DTW domain-containing protein 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_5.1_16666.t1 | gi|676483318|ref|XP_009062986.1| | hypothetical protein LOTGIDRAFT_129117 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_5.1_16666.t1 | gi|524864861|ref|XP_005089264.1| | PREDICTED: DTW domain-containing protein 1-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_5.1_16666.t1 | gi|327285893|ref|XP_003227666.1| | PREDICTED: DTW domain-containing protein 1 isoform X1 [Anolis carolinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5.1_16666.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16666.t1 atggttccatcaagaaagtgcttcaaagatggagatgacagacgaacagacaggcagattccagtaaacaggttgattag ttattcaatggaggaggaagcctttccgggattacagatcagttcttggtcattcctagacgatctgagtggacgcgcat catgtcctaaatgtgagaaatccaggaaatattactgctataactgttatgtacctaccaaagaaacaaagggactcata cccaaagttaagctcccactcaaaattgacattataaagcatccaaatgaatgtgatgggaagagtacgtcagcccatgc tgctgttctggctccaaatcatgtgaatgtttacacatacccatgcatacccaactacccagacccaaataaggttttac tcttgttccctggtccagaggcactaacgttggaggagcttgcagcgaaaggtgacatgaagtgcaaagatgacaaatgt agtacagaaaatgttctaggagaaaattccagtacagtagaagacagtactacacatgttatcggtaaaaacggagagac atcttcaccttctagtgctacagataatgataacgttcctgcaagtggtaagagaaaagctgacagtgacaaagacaatt tggttgtgaagaaaagacgaacagagcctccatttgatacagttgtagtgatagatagtacttggaatcaaaccaagagg atctcctcagatgaaaggcttaaagatctcacaaaaatcgagctcaaatcccgggagacaaaattttggagacatcagaa agacaatccgtccacatatttatccactgtggaggcaatttattatttagtgcgggactatcatgacctttttgtactaa cagattatgctggtgaatatgacaatcttctgttcttcttcagcttcatgtatcaaaaaattcgaaaattatatgacgga ggaaaaaatctcaaagcttttaaagaaagatctgatagaaaagcaaaggaaatggatcataaaatgccaaataaatcata a |
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Protein
| Protein ID | pfu_aug2.0_5.1_16666.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16666.t1 MVPSRKCFKDGDDRRTDRQIPVNRLISYSMEEEAFPGLQISSWSFLDDLSGRASCPKCEKSRKYYCYNCYVPTKETKGLI PKVKLPLKIDIIKHPNECDGKSTSAHAAVLAPNHVNVYTYPCIPNYPDPNKVLLLFPGPEALTLEELAAKGDMKCKDDKC STENVLGENSSTVEDSTTHVIGKNGETSSPSSATDNDNVPASGKRKADSDKDNLVVKKRRTEPPFDTVVVIDSTWNQTKR ISSDERLKDLTKIELKSRETKFWRHQKDNPSTYLSTVEAIYYLVRDYHDLFVLTDYAGEYDNLLFFFSFMYQKIRKLYDG GKNLKAFKERSDRKAKEMDHKMPNKS |
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