Gene
| Gene Model ID | pfu_aug2.0_5.1_16669 |
|---|---|
| Locus | scaffold5.1 : 237642 ... 240618 : + |
| To GenomeBrowser | scaffold5.1:237642..240618 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | pfu_aug1.0_28793.1_55275 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5.1_16669.t1 | 2 | 1 | AIG1 | 56 | 263 | 0.0 | 209.9 | 0.0 | 0.0 | 209.9 |
| pfu_aug2.0_5.1_16669.t1 | 1 | 1 | MMR_HSR1 | 57 | 171 | 8.9e-09 | 35.3 | 1.2e-11 | 2.2e-08 | 34.0 |
| pfu_aug2.0_5.1_16669.t1 | 1 | 1 | FeoB_N | 57 | 192 | 1.2e-06 | 27.9 | 1.2e-09 | 2.3e-06 | 26.9 |
| pfu_aug2.0_5.1_16669.t1 | 2 | 2 | AIG1 | 384 | 411 | 0.0 | 209.9 | 0.99 | 1800.0 | -2.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5.1_16669.t1 | gi|548412130|ref|XP_005740958.1| | PREDICTED: uncharacterized protein LOC102203463 [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_5.1_16669.t1 | gi|554836978|ref|XP_005928965.1| | PREDICTED: uncharacterized protein LOC102309843 isoform X1 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_5.1_16669.t1 | gi|554836980|ref|XP_005928966.1| | PREDICTED: uncharacterized protein LOC102309843 isoform X2 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_5.1_16669.t1 | gi|548357176|ref|XP_005730693.1| | PREDICTED: putative protein PHLOEM PROTEIN 2-LIKE A3-like [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_5.1_16669.t1 | gi|499051728|ref|XP_004576365.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5.1_16669.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16669.t1 atgtcaggaaaatcagtcactaagaagagtcaaataggacgggcggacagatttggagcagaggcttttaccttcgagaa cccttcagatggaccattgtacagttcaaatgatgtgcatcgtttctcaccgaacaagtcaacttacggtgttcaggaga atgaacggcgaatccttctgataggtaaaactggtgtcggcaaaagtgcaacaggaaataacatactcggggaaaagaca tttcaatcaaaaatgtcaggaaaatcagtcactaagaagagtcaaataggacgggcggacagatttggtaaaaagctcct actcgttgatactccaggaatcttcgatactggaaagacaaacgaggaagttatcacagaaatagtaaaatgtataggta taacaagtccaggcctacatgccattatattggtagtacatattggtcgttttacggaggaggaaaagaagacggttgat ctgtttctgaatcatttaggtcagcaactgattcaatttcttgtagttgtttttacccgaaaagatgatttagatcgtga aaatactaccattgacgagtatgtagatagccttgagccgtcttcattgcttgcagaaattattcagaaaagcagatgtc gatatgtagcctttgacaacacggcagttgggcaacaaaatgacgaccaagtcaaaagattattctctgtaatagaaaat ttgattcgagagaatggaggtacattctacacgaatgacatgtatagagaagcagagatggcaatgagacgtcgaatgga tgaagagcgcaggcgcttagaggaagaaaaaagactggcaattgaaaggattgaagctcctttcagagccaaaattgaaa atgaacgacgagaacgtgagtctttgtcacatgatttagtcttgactaaaatgcaaacggcatcccttacccatgacaaa tcccggatggaagaggaattagaaatgacgaaacgtcgatctgaaagatatgccgctgagagggaaaacgagagaagaag aatggaagaggaaagaaggagagatcaagaaatcaacgagagaaggatgagggaaattagagaggaatctcaaagaagag atgacgaaagaagaagagaatatgatcagaggcagcgacagatggaagacgatcgtagaagagataaagaggaaatgaat aaacaaagaaaagaaattgaaagggtgaaggcagagtatgataaaagaatgcgtgatcaaaatatcagggaagctgcgag agatgatgttgagaaagaaaaacccggaatccttgcaacaataatcgaggcagtgtctgaagtcccagttattggacctg ttgtaaaggttattggaaaattgttcaaactcttttag |
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Protein
| Protein ID | pfu_aug2.0_5.1_16669.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16669.t1 MSGKSVTKKSQIGRADRFGAEAFTFENPSDGPLYSSNDVHRFSPNKSTYGVQENERRILLIGKTGVGKSATGNNILGEKT FQSKMSGKSVTKKSQIGRADRFGKKLLLVDTPGIFDTGKTNEEVITEIVKCIGITSPGLHAIILVVHIGRFTEEEKKTVD LFLNHLGQQLIQFLVVVFTRKDDLDRENTTIDEYVDSLEPSSLLAEIIQKSRCRYVAFDNTAVGQQNDDQVKRLFSVIEN LIRENGGTFYTNDMYREAEMAMRRRMDEERRRLEEEKRLAIERIEAPFRAKIENERRERESLSHDLVLTKMQTASLTHDK SRMEEELEMTKRRSERYAAERENERRRMEEERRRDQEINERRMREIREESQRRDDERRREYDQRQRQMEDDRRRDKEEMN KQRKEIERVKAEYDKRMRDQNIREAARDDVEKEKPGILATIIEAVSEVPVIGPVVKVIGKLFKLF |
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