Gene
| Gene Model ID | pfu_aug2.0_5.1_16673 |
|---|---|
| Locus | scaffold5.1 : 302542 ... 305725 : + |
| To GenomeBrowser | scaffold5.1:302542..305725 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | pfu_aug1.0_1891.1_15652 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ets domain-containing protein elk-3-like | GO:0000978 GO:0001077 GO:0001525 GO:0003714 GO:0005634 GO:0005739 GO:0030154 GO:0032422 GO:0042060 GO:0045892 GO:0045944 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5.1_16673.t1 | 1 | 1 | Ets | 72 | 153 | 7.3e-38 | 128.5 | 2.70002e-41 | 1.3e-37 | 127.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5.1_16673.t1 | gi|291235822|ref|XP_002737846.1| | PREDICTED: ETS domain-containing protein Elk-3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_5.1_16673.t1 | gi|524894972|ref|XP_005103975.1| | PREDICTED: ETS domain-containing protein Elk-3-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_5.1_16673.t1 | gi|47551223|ref|NP_999792.1| | transcription factor Elk [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_5.1_16673.t1 | gi|241632816|ref|XP_002410379.1| | ETS domain-containing protein Elk-4, putative [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_5.1_16673.t1 | gi|391343267|ref|XP_003745934.1| | PREDICTED: uncharacterized protein LOC100897491 [Metaseiulus occidentalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5.1_16673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16673.t1 atggcaaatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgaatttccatacaagtttataaa tatttatattttgctgtcagatgtccgacaacattcagtctccccagcgttatctgactcgtcatccaggctgtctgacg acaacaaaagacttggtttaagttcaaacagaaacaaaataatggattccaacattacgttatggcagttcctgctggaa ttgttagttaaccagcaacatgctgacattatacaatggaccaatactgagggagaattcaaactcatcaacgcagagga agtggcacgattgtggggactgcgcaagaataaaacaaacatgaattacgacaagcttagtcgggctttacgttattatt acgacaaaaatatcatcaaaaaagtgatgggacaaaagtttgtctacaaatttgtttcttttccagaaatcgtaaaaacg gagaataaagtaacgttcaaagacaaaatggcgagtttagctcaaacttacggccaacatgttttccctcactttgcatc atatgaccccgcgcgaatacagtcgtctgctacgcaagcagcagcagcaggtacatcacatagagctctagactgtagca ttgtgaagaaagaagtgatactaccagaaagaccgcttagccatagtcctgtaccagtgtctttgtcattcgaaagtttc aaaggaagtaacagttgtacagtaaaaactgaaagtttatcatcgtcatcgtcatcaggtatttcattcagcagatcgtc tacatcatctaacgtaacaatcaagccgaagcctgtgccattaagtctttcattgccaacatctgacaatccaagtattg ttccaagcgttgtcagcggatttcctattccaagtcctaaggtgttcccgtcagctttccctcgtacacctattcatgtt ctcgccagtccggtgatcggaccaaggactccattcctccatttctggagctctttatcacccatagcaacaatgagccc gcgattgaatgcatcgtctgcttttcaattcccatcgttcgctccaaatcacgtgactctgtcgccaatggcgatttcaa gtttttctcaagttgaatctctggctacgccggcactgacttctctagccacgccgggtctgacgtcaccgacaagatcg atctcctgtgtcttatga |
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Protein
| Protein ID | pfu_aug2.0_5.1_16673.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16673.t1 MANDDDDDDDDDDDDDDDDEFPYKFINIYILLSDVRQHSVSPALSDSSSRLSDDNKRLGLSSNRNKIMDSNITLWQFLLE LLVNQQHADIIQWTNTEGEFKLINAEEVARLWGLRKNKTNMNYDKLSRALRYYYDKNIIKKVMGQKFVYKFVSFPEIVKT ENKVTFKDKMASLAQTYGQHVFPHFASYDPARIQSSATQAAAAGTSHRALDCSIVKKEVILPERPLSHSPVPVSLSFESF KGSNSCTVKTESLSSSSSSGISFSRSSTSSNVTIKPKPVPLSLSLPTSDNPSIVPSVVSGFPIPSPKVFPSAFPRTPIHV LASPVIGPRTPFLHFWSSLSPIATMSPRLNASSAFQFPSFAPNHVTLSPMAISSFSQVESLATPALTSLATPGLTSPTRS ISCVL |
|