Gene
| Gene Model ID | pfu_aug2.0_5.1_16675 |
|---|---|
| Locus | scaffold5.1 : 346209 ... 363994 : - |
| To GenomeBrowser | scaffold5.1:346209..363994 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | pfu_aug1.0_7599.1_02468 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transketolase-like protein 2 isoform x1 | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5.1_16675.t1 | 2 | 1 | Transketolase_N | 13 | 138 | 0.0 | 193.8 | 6.16571e-44 | 3.09999e-40 | 138.0 |
| pfu_aug2.0_5.1_16675.t1 | 2 | 2 | Transketolase_N | 137 | 212 | 0.0 | 193.8 | 8.5e-19 | 4.2e-15 | 55.3 |
| pfu_aug2.0_5.1_16675.t1 | 1 | 1 | Transket_pyr | 251 | 414 | 4.3e-38 | 130.5 | 1.40004e-41 | 7.0e-38 | 129.8 |
| pfu_aug2.0_5.1_16675.t1 | 1 | 1 | Transketolase_C | 430 | 545 | 6.2e-23 | 81.0 | 2.4e-26 | 1.2e-22 | 80.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5.1_16675.t1 | gi|524882420|ref|XP_005097854.1| | PREDICTED: transketolase-like protein 2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_5.1_16675.t1 | gi|676489538|ref|XP_009064971.1| | hypothetical protein LOTGIDRAFT_236318 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_5.1_16675.t1 | gi|759078808|ref|XP_011349198.1| | PREDICTED: transketolase-like protein 2 isoform X1 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_5.1_16675.t1 | gi|524882422|ref|XP_005097855.1| | PREDICTED: transketolase-like protein 2-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_5.1_16675.t1 | gi|759078810|ref|XP_011349199.1| | PREDICTED: transketolase-like protein 2 isoform X2 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5.1_16675.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16675.t1 atggctagtgttaataaagaaacccttcagaccctgaaggacatagcaaacaaactaaggattcattctataaatagtac taccgctgccggtacaggacatcctacatcatgctgttccatagcagaagtgatgtctgtgctgttcttcaacaccatgc gctacagtatacaggaaccaaggggagctaacaatgacagatttgttttgtccaagggtcatgctgcccctattttatat gctgcatgggctgaggcaggactccttaaggctgatgaccttttgaacctgaggaagctaagttgtgacctggagggtca cccaacacctaggctgaactttgttgatgtagccactgggtcattaggtcaaggacttagttgtgctgctggtatggcgt atactgggaagcactttgacaaaggagaatggcatacagtagttgttgacggccatgatgttgaggctctatgcaaagct ttccatgatgcctccactgtgaagggcaagccaacatgtctggtagctaagacatacaaaggaaaaggcattccaggaat tgaggatgcagaaaattggcacgggaagccccttggtgctaagtctgcagatgccctagctactataacaggattgatta aaaacaatggaccccatggtttgcctatacagagcccatccgataagctgtctgaagccgtggtggatacaatcttgttg tcagaggcacctagctataaaatgggagaaaaggttgctacaagagctgcttatggtacagccttggtcaagatagggaa gtccagtcagagagtcgtagccatggatggtgataccaaaaactccacttttgccatcaaattcaaggacgcttttccgg ataggttcattgagtgttttatagcagaacagaatctggtgggtgtagggatagggtgtggtacccgtaataggtgtgta ccatttattagcacctttgcctgcttcctgaccagggcatttgaccagatacgaatgggtgctatctcacagaccaatgc caactttgtcggatctcactcaggagtctctattggggaagatggcccttcacagatggcgttagaagacctgtccatgt tccgttctataccgggatctactgtgttctaccctagtgacgctgtatcagcagagagggctatagaattagcagctaac actaaaggaatctgctttgtcaggaccagccgtccagcaactcctgtcatatacagtcctgatgagaaatttgaagttgg cttggctaaaatagtccgccaaagtaagaatgacaaggtcttactgattggatgctgtgtaacgctgtttgaggctttga aggctgctgacgagctggcaggaagtggtatcaatgtacgtgttattgaccctttcacactgaaaccattggatgctaca actataatcaacagtgctaaagaatgtggagggaaaatcatcactattgaagatcactatcctgaaggtggacttggaga ggcagtttgtggtgcagtagccgagaataccggcatctcagtgaagaagctggctgtacgagagataccgcgtagtggaa agagtgacgaactcttacagaaatacggcataagtgcgagctgtatcgtcaaggctgtccaagaagtattgaagtaa |
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Protein
| Protein ID | pfu_aug2.0_5.1_16675.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16675.t1 MASVNKETLQTLKDIANKLRIHSINSTTAAGTGHPTSCCSIAEVMSVLFFNTMRYSIQEPRGANNDRFVLSKGHAAPILY AAWAEAGLLKADDLLNLRKLSCDLEGHPTPRLNFVDVATGSLGQGLSCAAGMAYTGKHFDKGEWHTVVVDGHDVEALCKA FHDASTVKGKPTCLVAKTYKGKGIPGIEDAENWHGKPLGAKSADALATITGLIKNNGPHGLPIQSPSDKLSEAVVDTILL SEAPSYKMGEKVATRAAYGTALVKIGKSSQRVVAMDGDTKNSTFAIKFKDAFPDRFIECFIAEQNLVGVGIGCGTRNRCV PFISTFACFLTRAFDQIRMGAISQTNANFVGSHSGVSIGEDGPSQMALEDLSMFRSIPGSTVFYPSDAVSAERAIELAAN TKGICFVRTSRPATPVIYSPDEKFEVGLAKIVRQSKNDKVLLIGCCVTLFEALKAADELAGSGINVRVIDPFTLKPLDAT TIINSAKECGGKIITIEDHYPEGGLGEAVCGAVAENTGISVKKLAVREIPRSGKSDELLQKYGISASCIVKAVQEVLK |
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