Gene
| Gene Model ID | pfu_aug2.0_5.1_16677 |
|---|---|
| Locus | scaffold5.1 : 412465 ... 426164 : - |
| To GenomeBrowser | scaffold5.1:412465..426164 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | pfu_aug1.0_4300.1_16335 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial import inner membrane translocase subunit tim17-b | GO:0015031 GO:0044425 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5.1_16677.t1 | 1 | 1 | Tim17 | 8 | 132 | 3.2e-31 | 108.0 | 5.5e-35 | 4.1e-31 | 107.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5.1_16677.t1 | gi|675854450|ref|XP_009012785.1| | hypothetical protein HELRODRAFT_154526 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_5.1_16677.t1 | gi|662225640|ref|XP_008487229.1| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim17-B-like [Diaphorina citri] | 0.0 |
| pfu_aug2.0_5.1_16677.t1 | gi|198454588|ref|XP_002137912.1| | GA26255 [Drosophila pseudoobscura pseudoobscura] | 0.0 |
| pfu_aug2.0_5.1_16677.t1 | gi|195156926|ref|XP_002019347.1| | GL12286 [Drosophila persimilis] | 0.0 |
| pfu_aug2.0_5.1_16677.t1 | gi|72006105|ref|XP_783220.1| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim17-B [Strongylocentrotus purpuratus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5.1_16677.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16677.t1 atggaagaatatgcaagagatccatgtccatggcgaatagtggatgattgtggtggagccttttctatgggccttatagg cggctctctgtttcatgctattggaggattcagaaatgctaaagggggtttcacgaacaggctggctggtatgaaaactg gaattaaagtgaaatctcctgtaactggtggtaattttgcagtgtggggaggtttattttcagctattgactgttctttg gtatatataaggaaaaaagaggatccattcaactctatagccagtggtgcattaacaggagctgtccttgcatgtagaaa tggtccagttgccatggtcggatcagcagcaataggaggccttttgctgggattaattgaaggagttggtataatgatga ataaaatgatggcagatcaatttaatccagccaatagaatgatgatggaggaagcccctccccctgggccattgccaatc tcgtcgccgtcacaagattccgctccaacatcatcgtttccgtttacgacgccgtaccaggcacatcagtga |
|
Protein
| Protein ID | pfu_aug2.0_5.1_16677.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16677.t1 MEEYARDPCPWRIVDDCGGAFSMGLIGGSLFHAIGGFRNAKGGFTNRLAGMKTGIKVKSPVTGGNFAVWGGLFSAIDCSL VYIRKKEDPFNSIASGALTGAVLACRNGPVAMVGSAAIGGLLLGLIEGVGIMMNKMMADQFNPANRMMMEEAPPPGPLPI SSPSQDSAPTSSFPFTTPYQAHQ |
|