Gene
| Gene Model ID | pfu_aug2.0_5.1_16679 |
|---|---|
| Locus | scaffold5.1 : 440693 ... 442784 : - |
| To GenomeBrowser | scaffold5.1:440693..442784 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5.1_16679.t1 | 1 | 1 | DAO | 7 | 238 | 1.4e-24 | 86.7 | 1.4e-27 | 1.6e-24 | 86.4 |
| pfu_aug2.0_5.1_16679.t1 | 2 | 1 | Pyr_redox_2 | 7 | 105 | 3.7e-06 | 26.9 | 1.4e-08 | 1.5e-05 | 24.9 |
| pfu_aug2.0_5.1_16679.t1 | 2 | 2 | Pyr_redox_2 | 197 | 214 | 3.7e-06 | 26.9 | 0.78 | 890.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5.1_16679.t1 | gi|390352215|ref|XP_782961.2| | PREDICTED: uncharacterized protein LOC577652 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_5.1_16679.t1 | gi|390352219|ref|XP_800708.3| | 0.0 | |
| pfu_aug2.0_5.1_16679.t1 | gi|196012963|ref|XP_002116343.1| | hypothetical protein TRIADDRAFT_60335 [Trichoplax adhaerens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_5.1_16679.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16679.t1 atgagtatggaaggttacgatgtctgtatcgttggagctggtatgattggttctgctgctgcacgtcatgcatcattgaa cacaggagtaagggtgtgtttgattggaccagcggaacccactgagagggtgttaaaaactggaaaagaagtttttggaa cgtactttgaccaagggcggatcactaggtctactgccttcagacctgtatgggcgttactggctcaaagatccatcaaa cggtacagggaactggaacagaagtccggaatagacttttatcgggaagtcggagagttaacaataggaaccaaagatgg aaatcatatggcaaaagttacagaaaatgccaaggaaagtggaattttacaacgtctgtataatatggattttgtgtcgt tgaggacacacttcccttcaatggtttactctacgtcggattttgcacttcacaatcccacaaactcgggatacataaac ccccgacaaatggtcgctgctcagattatggttgcacagaaacaaggttgtgtggtcaaacgcgacatcgtcctggacat tacaaaatctgaggacaattggtacattttacagactgagtctggcaccgtcctgaaagccagaaaggtactattggcaa ccaatgtgtttacttctatgaacaatttgctaggcaatgttcatcttgaattcacaccaatgccccaaactgtaacgctg gcagaggtatccgctcacgatgcgtacaaactacggtaa |
|
Protein
| Protein ID | pfu_aug2.0_5.1_16679.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16679.t1 MSMEGYDVCIVGAGMIGSAAARHASLNTGVRVCLIGPAEPTERVLKTGKEVFGTYFDQGRITRSTAFRPVWALLAQRSIK RYRELEQKSGIDFYREVGELTIGTKDGNHMAKVTENAKESGILQRLYNMDFVSLRTHFPSMVYSTSDFALHNPTNSGYIN PRQMVAAQIMVAQKQGCVVKRDIVLDITKSEDNWYILQTESGTVLKARKVLLATNVFTSMNNLLGNVHLEFTPMPQTVTL AEVSAHDAYKLR |
|