Gene
| Gene Model ID | pfu_aug2.0_5.1_16680 |
|---|---|
| Locus | scaffold5.1 : 448376 ... 469504 : - |
| To GenomeBrowser | scaffold5.1:448376..469504 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | pfu_aug1.0_3134.1_59149 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5.1_16680.t1 | 12 | 1 | zf-H2C2_2 | 555 | 560 | 6.6e-18 | 64.0 | 2.2 | 5400.0 | -2.0 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 1 | zf-C2H2 | 555 | 576 | 6.7e-24 | 82.7 | 0.017 | 42.0 | 4.7 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 1 | zf-C2H2_4 | 556 | 576 | 1.1e-16 | 59.8 | 0.31 | 770.0 | 0.8 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 2 | zf-H2C2_2 | 703 | 711 | 6.6e-18 | 64.0 | 0.56 | 1400.0 | -0.2 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 2 | zf-C2H2 | 704 | 726 | 6.7e-24 | 82.7 | 0.00031 | 0.76 | 10.2 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 2 | zf-C2H2_4 | 705 | 726 | 1.1e-16 | 59.8 | 0.24 | 600.0 | 1.1 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 3 | zf-H2C2_2 | 721 | 735 | 6.6e-18 | 64.0 | 1.5 | 3800.0 | -1.5 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 3 | zf-C2H2_4 | 729 | 752 | 1.1e-16 | 59.8 | 0.0019 | 4.8 | 7.7 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 3 | zf-C2H2 | 729 | 752 | 6.7e-24 | 82.7 | 0.0038 | 9.4 | 6.8 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 4 | zf-H2C2_2 | 778 | 799 | 6.6e-18 | 64.0 | 2.6e-05 | 0.065 | 13.5 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 4 | zf-C2H2 | 788 | 810 | 6.7e-24 | 82.7 | 6.2e-07 | 0.0015 | 18.7 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 4 | zf-C2H2_4 | 788 | 811 | 1.1e-16 | 59.8 | 6.3e-07 | 0.0016 | 18.6 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 5 | zf-H2C2_2 | 802 | 826 | 6.6e-18 | 64.0 | 0.00016 | 0.39 | 11.0 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 5 | zf-C2H2 | 818 | 841 | 6.7e-24 | 82.7 | 6.1e-05 | 0.15 | 12.4 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 5 | zf-C2H2_4 | 818 | 841 | 1.1e-16 | 59.8 | 0.00021 | 0.53 | 10.7 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 6 | zf-H2C2_2 | 832 | 862 | 6.6e-18 | 64.0 | 2.8e-05 | 0.07 | 13.4 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 6 | zf-C2H2 | 849 | 873 | 6.7e-24 | 82.7 | 5.5e-06 | 0.014 | 15.7 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 6 | zf-C2H2_4 | 849 | 873 | 1.1e-16 | 59.8 | 6.0e-05 | 0.15 | 12.4 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 7 | zf-H2C2_2 | 865 | 890 | 6.6e-18 | 64.0 | 8.2e-09 | 2.0e-05 | 24.6 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 7 | zf-C2H2 | 879 | 901 | 6.7e-24 | 82.7 | 5.2e-05 | 0.13 | 12.6 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 7 | zf-C2H2_4 | 879 | 901 | 1.1e-16 | 59.8 | 1.6e-05 | 0.04 | 14.2 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 8 | zf-H2C2_2 | 894 | 919 | 6.6e-18 | 64.0 | 0.00081 | 2.0 | 8.8 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 8 | zf-C2H2 | 907 | 932 | 6.7e-24 | 82.7 | 1.7e-06 | 0.0043 | 17.3 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 8 | zf-C2H2_4 | 907 | 932 | 1.1e-16 | 59.8 | 8.0e-05 | 0.2 | 12.0 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 9 | zf-H2C2_2 | 924 | 950 | 6.6e-18 | 64.0 | 0.006 | 15.0 | 6.1 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 9 | zf-C2H2 | 939 | 963 | 6.7e-24 | 82.7 | 7.1e-05 | 0.18 | 12.2 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 9 | zf-C2H2_4 | 939 | 963 | 1.1e-16 | 59.8 | 3.7e-05 | 0.091 | 13.1 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 10 | zf-H2C2_2 | 955 | 980 | 6.6e-18 | 64.0 | 1.0e-07 | 0.00025 | 21.1 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 10 | zf-C2H2 | 970 | 991 | 6.7e-24 | 82.7 | 1.1e-07 | 0.00027 | 21.0 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 10 | zf-C2H2_4 | 971 | 991 | 1.1e-16 | 59.8 | 2.0e-05 | 0.049 | 13.9 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 11 | zf-H2C2_2 | 983 | 1005 | 6.6e-18 | 64.0 | 7.1e-08 | 0.00018 | 21.6 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 11 | zf-C2H2 | 998 | 1020 | 6.7e-24 | 82.7 | 0.00061 | 1.5 | 9.3 |
| pfu_aug2.0_5.1_16680.t1 | 11 | 11 | zf-C2H2_4 | 998 | 1020 | 1.1e-16 | 59.8 | 0.00077 | 1.9 | 9.0 |
| pfu_aug2.0_5.1_16680.t1 | 12 | 12 | zf-H2C2_2 | 1011 | 1020 | 6.6e-18 | 64.0 | 0.48 | 1200.0 | 0.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5.1_16680.t1 | gi|524886212|ref|XP_005099703.1| | PREDICTED: uncharacterized protein LOC101861956 [Aplysia californica] | 0.0 |
| pfu_aug2.0_5.1_16680.t1 | gi|676471941|ref|XP_009059335.1| | hypothetical protein LOTGIDRAFT_124377, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_5.1_16680.t1 | gi|688551433|ref|XP_009299159.1| | PREDICTED: zinc finger protein 721-like [Danio rerio] | 9.99995e-41 |
| pfu_aug2.0_5.1_16680.t1 | gi|617460728|ref|XP_007571905.1| | PREDICTED: gastrula zinc finger protein XlCGF57.1-like isoform X1 [Poecilia formosa] | 2.0e-37 |
| pfu_aug2.0_5.1_16680.t1 | gi|617460732|ref|XP_007571906.1| | PREDICTED: gastrula zinc finger protein XlCGF57.1-like isoform X2 [Poecilia formosa] | 6.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_5.1_16680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16680.t1 atgagaacctacaaagagccaaagcggattgacaagccacaggcacgtgattctgccatacggcaactcaatgctgatgc atctaagtttgctgcaattcgctctgctgcaataagtattcaagaggaggataatgagggaagcacacaaacttctacaa acaacctgcaggccaacgcaaatagcccttgcaaaaaccatgtgacacaagaacacatagagcaggatacagcagtagat ctatccaagcatgccaacaaggaccctcatccaaggtcacaggcaccagttgccagtaatgatatcaactgtgaggtgca aaatgaagaacatggaatcgaggacaaactaaattcctcatactcatcttcgtcaatcccaacagattctgtcatctctt cctcatcaaagagtgaccttgatctctccttcacctctatagagcaaaataacacttttccaaaagaaagttatgaatct gttgataatgcagctgatggagagaacaatgacattgtagctgaaggaatgggcatcctagataacagtgaggtgaattc aaaagaaaatgagaaagactctgatgtcccagtaacaaagaagaaatcttcaccaaagcaatcaaagaaacagaaggcaa aggttggaggaatgaaaaagggcaatagtggagataagatgaaagaagcccgtgttttgaagaagaaggcggtgaagaaa gtgttaaaaagcgataaaaaactttccaaaaatatgataggaaatactgtagttccaaaaggaaatgttccaaaagctag gggaagaccaaaaggtgcaaaaggcaagaaaaaacagaaagaagaaagtactgaattggcaaatgatttaaaaatagaca ctaatgtgccaagtgacaattcttctgcagtgtctcctaggtcatctaaaagaactccaaagaaaaacagaaaatatgat agtgatgaagaaagtcacacaagaaagttatcacctagggcgggaaagaaacggaaattagttttcgatatggaggatga agagttcgaagaaggattaattgaaggttttgatgtcaaagaagacaaagatgtcaaagagaaggaggaaacaaagtcaa aaagtcctccaaaaaagaggaagaagcagatgaaatcttcaaccaatgaaggaaatgaagaggtgaaagaagatgctgat gaaaacctcaatttagatggaactgaagttacaaagaagaaaaagaaacagataaaaccaaaggttttgaacagtgaaca catcgataaaaatgcagggactgaaaagcaagtgggagaaaaaggtaccatttccaagaagaaaaagaaatccaaactga aagtaaaaaaatctggtgaagttcaatcagacacattggacacaagtgaaaaacctaaatcagaggaggaaagtgtacta aatgatatgtcttcacaaattaaggatgaaagtgcaagcaatagtgccatgaaaaatgacatgccagttgtaaagaagag aaagtatgtacgaaagaagccacttaaatctcaggaaataaataagattgttgaagaggaagaggaaaatgaggaaaaag aaactgatggtgctagcgatttgtctgtaatcggtaacgaaaagaaggatcaaatttcaataagctgtccattatgtggg catatttctcacagcaagtctgccaacacacgtcatatcaaaaggtgtgtcaatgaagatgacaagctgaagatggaaga tttgaaagccaatgaaagtacggaaaaggaggagactattaaggaagcagaggaggaggaggaagaactcagcaaagagg aggagcaatctttacaggacacgagtcaggtagacgatgacgctagtcacaaggacagtagttacaatgataacgagggt gatatatcattaacagaagaggaaatacatttgctggcaaaagattttgctttggactacatggataattcatcagagat actgaattcatcaagtgagaaaaaaatcgtcaacttagccgaattttctaatagggagtttccaagtgacatatcagaca tcattaaaaagcgagcaccaaattcattatttatgtgtgagcattgtgactattgtactccgaagcgggcaatgctgggt aggcatctacgtattcatggaatatttgtctgtctacgctgtaactacatttgtgatacacgtagcaagttgaaagaaca tgttttagaagttcacagagatcgtgcagactacaagctatgtaggaactgtagcagatatgtgaaatgtgcagatatta cgatagaacaacatatggaaatctgtcaaggtcctgtgccatttaagtgtcctcattgtgacaaggaattcaagtatgaa tcatcattaaagtctcatgtcattcgccataatcctgacgcccctaagaaattccactgcccagaatgcccttatgaatc aaattacaaagcaaacttgaaaaagcatctcaaaaatattcacagtgataaaactgaaactgagtacaagtgcccatttg cagactgtgaaaaaatatttcacactcaagacaatttgaaaagacacttcaagtttcactcagatgaacgcccgcatgcg tgtacgaaatgtgacaagaaatttaaaaccgcagcagctttacgaggacattatgtggtccatagcccatctcggccatt taagtgcaatatcaatgactgtacaaaggacttcaggtccaaaaaactcttgaaaaatcacatggaggaattccacaacc tgacagagaagaagtatgcgtgtgattacgcaggatgtgactttgcgttcttcaagaggagtcatctagagaggcacaaa attacacatacaggagaacgtaagtttggttgtacagcttgtggaaaggccttcagacactcagacaacctaaaggtaca catgaggcagcacacaaatgaaaaaccggtcaagtgtcatctatgtagctttgcgtgcagacagaaaagctcactgcaat atcatcttcgcaaatttcatcagatcttcaatcggccgagatcaatcagttcagaggccaaaaacttatcaactttggtt agtgcagtatatagtagtgttgacgatgggttaacttcatctgtctcgtccgaatcaaaagaaaatcatcagggcttacc attagacagcaaggaggaaatagaggagcagaaaaacactgaacctttctcacctattaaaaaatctcaaaatgctatgg atttgtatgaatttagatctgacgaagaatttggtgacgattctatacttatgcctctaaggcaagaaaggacttccaca cctcttagacctgaaaagatctcatctcatcaaagtgtttcgtttgatgaaaatagtgaatcctcggataaaacggacac aaaattagacgatcaacagtcgagtactttgtcagagaaaaactctggcgagattgttgaaagcattaaaatagaagata tcataattgaagaagtggtaaaatttgctgaaaacaatgaaggtgaatctagctttgtgaaaaatgatcaagtgaaggag cctgaagaaccagttaaagtgttgccaaaaccaaagaaaaagcctggtagaaagaagggctttaagttgaaacccaagac tgaggagactgcaaagccgatcaaagataaagatgaagctaagaatcctgaatctgaggaagtgacagaaaaggcagagc ctcctgcaaagccaaaaggaaaacgtggccgtaaaccaaaagcacagaagttgctggaacaagcagagaaagtggaagct aagaatacatcagaagaaaaaccccaagaaaaacctcctagaaagaaaccaggtccaaagccaaagaaggacaaagacaa aaaggaagttgacaaagcagtgaagattccaaagaagcgtggaccaaagaaaaagaaagtggtaccagttgatgacaaca ctgaggaccaagaggaaccatctccaccaagaaagaagcgaaaatatacacgcaggaaaagtactgggaaaaagcccggc agaaaaccaaagggcgaaaaggctgacaaagaggatagcgtggaggaggaggaagaaaccatcatatacagtgagttgga ccaaaacacagcaaaggaggatgaagatgatggagaagctactgaaattgaagggtttgatgatgatgacagaaagagtc ctagtatagaggaaaaaacagaagaaaaggttgaagaatctgaagaaatagttgaagttcctgagaagattcaggaagaa aatgacaacaaagaccctcagtctccagttattgaagaggaggaggaggaggaaaaggacaaggctgacacggctattgt tccagaagtcacagaaaatgaagctgtagctaaagtagaggttgaggagaagaaaggtgaagaggagagtgagaggatga gtagtggtattgatactgattttgaggaggatctgaagccccctcctgctcctcgaccaccacctgtagtggacagcgat gagggagatatagagtcaggtcctgaagagatggacactccagggagagattttgagtcgacacctcccaaatctgttca gaatcatagtgtacaaagcctgagagactatgaatctacacctccaaatctgttcaacctgatagtgtaccaaactatgg aacctcccagtcaaccaccattaagccaaggctacacagaggatagaagtgagctctccaatcctgtacctagcaatatt agctacgctcctcctggctctgtagagctgccaggttccgctcagagtgtgcctcaagctacatcacaaaatggacaaga gtatgtctctcagtctgattctacaatgccagaggtggataaggattatcttggtcagtatctccagcagtttgattcga atcgatctgaagatgaaaacaacagattatctcaggctgaagaaagaccagaagaccacctaaacattccaacatcacca cagaaagaactgtcttccttaaacatgagttctccaggtgtgccacctctcaatctctcaacatcatctgacagaggaga aggcattcctcctaaaggaacagacatgtctaacaaacgaatggagattctttctgttgacagacaacatgaagaacact ttcaaacaagaagtgaaaaccccagtcgatcttcagaaagaataccagataatgtatatgatagcataagctctatgaac tcttatttaccacctggatcaagggaaacaccaacaattttcccaccaacttcaacgtctacaccttacatgccattctc agagaatgaggccattttgcagaggcagaggatgacaactccattcttggcacaaaatgatcagaatgcattacaaaatc ttcacagaatgacagactcggcattagcatccaacaatccctcttctttactacgacggcctactactgtaccatcgagg gaggaaatattttcaaatccttcagctgtggcacagtcaatggctagaaacccatttcactctacatggtcaagtcaaga tgttcgtcatccacactggagtcaaaccccgtatctacagcggcctattgacagacagtcaggaacaactaccaactctc tctttgccaaggacaactacctcactgggcgtgactttgtgtttgatacttctagaagatcagttactgaaaggaatatg ttcccaggacttgcacagtctcagagaccagagttgccccatgaaactttccctagcaatgagaggtttgactttagtta ctttgggctacctggctaccctggtgctcctactctggactatgctagatcagctgggaccacatcacagaaaacatttg atgagcgatacaggcaaacaacagggagtatggctgacttcaggggacttcctcagtccacaacctctgagatgtttaga agtatgaactctacattcaactttgataagtatatgtatgcaagggatccaatgtatcatactcagcacattagtgaaag tactaacagtccatttcttccacatggtgtgcctacccagcatgctatgtttgatcgtgattacaccagaggattttacc agaatggaccttatggatttatgaatgataaaccttatgcagcagcggctgcagcagcttccgctaagctgtcacatact acaaccccagggatgggacaggatcgagaatttgtgccacgcccaaatacagcagcggcagcagcagctgatagtcagat gcaagatccgtaccgacatcccatgctctataacatgatgaaccgatactttgaatga |
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Protein
| Protein ID | pfu_aug2.0_5.1_16680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16680.t1 MRTYKEPKRIDKPQARDSAIRQLNADASKFAAIRSAAISIQEEDNEGSTQTSTNNLQANANSPCKNHVTQEHIEQDTAVD LSKHANKDPHPRSQAPVASNDINCEVQNEEHGIEDKLNSSYSSSSIPTDSVISSSSKSDLDLSFTSIEQNNTFPKESYES VDNAADGENNDIVAEGMGILDNSEVNSKENEKDSDVPVTKKKSSPKQSKKQKAKVGGMKKGNSGDKMKEARVLKKKAVKK VLKSDKKLSKNMIGNTVVPKGNVPKARGRPKGAKGKKKQKEESTELANDLKIDTNVPSDNSSAVSPRSSKRTPKKNRKYD SDEESHTRKLSPRAGKKRKLVFDMEDEEFEEGLIEGFDVKEDKDVKEKEETKSKSPPKKRKKQMKSSTNEGNEEVKEDAD ENLNLDGTEVTKKKKKQIKPKVLNSEHIDKNAGTEKQVGEKGTISKKKKKSKLKVKKSGEVQSDTLDTSEKPKSEEESVL NDMSSQIKDESASNSAMKNDMPVVKKRKYVRKKPLKSQEINKIVEEEEENEEKETDGASDLSVIGNEKKDQISISCPLCG HISHSKSANTRHIKRCVNEDDKLKMEDLKANESTEKEETIKEAEEEEEELSKEEEQSLQDTSQVDDDASHKDSSYNDNEG DISLTEEEIHLLAKDFALDYMDNSSEILNSSSEKKIVNLAEFSNREFPSDISDIIKKRAPNSLFMCEHCDYCTPKRAMLG RHLRIHGIFVCLRCNYICDTRSKLKEHVLEVHRDRADYKLCRNCSRYVKCADITIEQHMEICQGPVPFKCPHCDKEFKYE SSLKSHVIRHNPDAPKKFHCPECPYESNYKANLKKHLKNIHSDKTETEYKCPFADCEKIFHTQDNLKRHFKFHSDERPHA CTKCDKKFKTAAALRGHYVVHSPSRPFKCNINDCTKDFRSKKLLKNHMEEFHNLTEKKYACDYAGCDFAFFKRSHLERHK ITHTGERKFGCTACGKAFRHSDNLKVHMRQHTNEKPVKCHLCSFACRQKSSLQYHLRKFHQIFNRPRSISSEAKNLSTLV SAVYSSVDDGLTSSVSSESKENHQGLPLDSKEEIEEQKNTEPFSPIKKSQNAMDLYEFRSDEEFGDDSILMPLRQERTST PLRPEKISSHQSVSFDENSESSDKTDTKLDDQQSSTLSEKNSGEIVESIKIEDIIIEEVVKFAENNEGESSFVKNDQVKE PEEPVKVLPKPKKKPGRKKGFKLKPKTEETAKPIKDKDEAKNPESEEVTEKAEPPAKPKGKRGRKPKAQKLLEQAEKVEA KNTSEEKPQEKPPRKKPGPKPKKDKDKKEVDKAVKIPKKRGPKKKKVVPVDDNTEDQEEPSPPRKKRKYTRRKSTGKKPG RKPKGEKADKEDSVEEEEETIIYSELDQNTAKEDEDDGEATEIEGFDDDDRKSPSIEEKTEEKVEESEEIVEVPEKIQEE NDNKDPQSPVIEEEEEEEKDKADTAIVPEVTENEAVAKVEVEEKKGEEESERMSSGIDTDFEEDLKPPPAPRPPPVVDSD EGDIESGPEEMDTPGRDFESTPPKSVQNHSVQSLRDYESTPPNLFNLIVYQTMEPPSQPPLSQGYTEDRSELSNPVPSNI SYAPPGSVELPGSAQSVPQATSQNGQEYVSQSDSTMPEVDKDYLGQYLQQFDSNRSEDENNRLSQAEERPEDHLNIPTSP QKELSSLNMSSPGVPPLNLSTSSDRGEGIPPKGTDMSNKRMEILSVDRQHEEHFQTRSENPSRSSERIPDNVYDSISSMN SYLPPGSRETPTIFPPTSTSTPYMPFSENEAILQRQRMTTPFLAQNDQNALQNLHRMTDSALASNNPSSLLRRPTTVPSR EEIFSNPSAVAQSMARNPFHSTWSSQDVRHPHWSQTPYLQRPIDRQSGTTTNSLFAKDNYLTGRDFVFDTSRRSVTERNM FPGLAQSQRPELPHETFPSNERFDFSYFGLPGYPGAPTLDYARSAGTTSQKTFDERYRQTTGSMADFRGLPQSTTSEMFR SMNSTFNFDKYMYARDPMYHTQHISESTNSPFLPHGVPTQHAMFDRDYTRGFYQNGPYGFMNDKPYAAAAAAASAKLSHT TTPGMGQDREFVPRPNTAAAAAADSQMQDPYRHPMLYNMMNRYFE |
|