Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_5.1_16682
Locus scaffold5.1 : 498416 ... 509844 : -
To GenomeBrowser scaffold5.1:498416..509844
Genes list of scaffold scaffold5.1
Synonym pfu_aug1.0_18088.1_32881

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_5.1_16682.t1 gi|260800474|ref|XP_002595155.1| hypothetical protein BRAFLDRAFT_67950 [Branchiostoma floridae] 2.0e-16
pfu_aug2.0_5.1_16682.t1 gi|260800476|ref|XP_002595156.1| hypothetical protein BRAFLDRAFT_67962 [Branchiostoma floridae] 6.0e-12

Transcript
Transcript IDpfu_aug2.0_5.1_16682.t1
Definition-
>pfu_aug2.0_5.1_16682.t1
atggggaccaattgtgccccactccttgccgacattttcctttactcatacgaagctgaattcattcaatctttggtctc
tgatgggaatagatacttagcttctgacttcaacttcacttatagatacatagagaatgcgttgtccatcagtaatccaa
aattcacggattacgtgagcagtatctgtcctccagagcttgaagtcaaagaaactacagagacaaataattcagcatcc
tatttggacgtaatgttgtcctacgacactgatggtcacatgaacacctcactctatgacaaacgtgacgacttcaattt
cagcattacaaactttccttttctgagtagcaacatcccttcatctccaggttatggcgtgttcatatctcaattaatac
gctatgccaaagcaagtaccgaatatatggattttgttctgagagctaggcgtctttcagataagcttctcagtcaggga
tatgtttgtgaccgactaacatcgtcactgaggaagttctacggtcgatatggggaactcgtcatacactatgatgtccc
actctcaagaatgattttgtgtgatttagcgttgatggtgattctagcaatgacatcatggggacttcagtgtgttaaga
aagatgcatgctcgtgtgaaatggacgacggaagtggaataatcaacattacttcactaggagataaaaatgcccctaga
tttaaggatgttcctgccactatagttggagaaccctatatgtattcgttcaacccgtgtcttcctttctcggatggaat
gtgcattgaagtaaacgcttgccaatatacccaagatcacgcaaaacagtacgccctagcttcaccggaagatgtcaatt
ttacactccaagacaacaatgtcattatgactcagcaacacacggatgatactggcattttgagatttaaggacgtaatt
gctccagataattttttctactcctacaacccttgttttccgtttgacgaaggtacctgtcgtggtgcagcggtttgtca
gcttagcggtgatatggagacacagtacttggtaggtaattcatctactgctacattccatcacgacaaagacaataaaa
tcagtgtcatctatacagcagtggatcatcaaggcatcaatcggacttcggttgtaaatctgatatgcgacaggcaggcc
acaacatcttctttcacggcatttggcgagttagagaaaggaacttattacttccggttgacaagtagccaagtttgtcc
agaccaagtatag

Protein
Protein IDpfu_aug2.0_5.1_16682.t1
Definition-
>pfu_aug2.0_5.1_16682.t1
MGTNCAPLLADIFLYSYEAEFIQSLVSDGNRYLASDFNFTYRYIENALSISNPKFTDYVSSICPPELEVKETTETNNSAS
YLDVMLSYDTDGHMNTSLYDKRDDFNFSITNFPFLSSNIPSSPGYGVFISQLIRYAKASTEYMDFVLRARRLSDKLLSQG
YVCDRLTSSLRKFYGRYGELVIHYDVPLSRMILCDLALMVILAMTSWGLQCVKKDACSCEMDDGSGIINITSLGDKNAPR
FKDVPATIVGEPYMYSFNPCLPFSDGMCIEVNACQYTQDHAKQYALASPEDVNFTLQDNNVIMTQQHTDDTGILRFKDVI
APDNFFYSYNPCFPFDEGTCRGAAVCQLSGDMETQYLVGNSSTATFHHDKDNKISVIYTAVDHQGINRTSVVNLICDRQA
TTSSFTAFGELEKGTYYFRLTSSQVCPDQV

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495