Gene
| Gene Model ID | pfu_aug2.0_5.1_16683 |
|---|---|
| Locus | scaffold5.1 : 533049 ... 545292 : - |
| To GenomeBrowser | scaffold5.1:533049..545292 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | pfu_aug1.0_17717.1_47120 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5.1_16683.t3 | 3 | 1 | Ank_4 | 109 | 145 | 5.1e-16 | 58.7 | 4.5e-07 | 0.0011 | 19.3 |
| pfu_aug2.0_5.1_16683.t3 | 2 | 1 | Ank_2 | 109 | 195 | 1.9e-14 | 53.7 | 2.5e-15 | 6.3e-12 | 45.6 |
| pfu_aug2.0_5.1_16683.t3 | 3 | 1 | Ank_5 | 115 | 140 | 1.7e-12 | 47.1 | 0.00025 | 0.62 | 10.3 |
| pfu_aug2.0_5.1_16683.t3 | 3 | 2 | Ank_5 | 117 | 166 | 1.7e-12 | 47.1 | 4.0e-06 | 0.0099 | 16.1 |
| pfu_aug2.0_5.1_16683.t3 | 4 | 1 | Ank | 122 | 130 | 2.3e-13 | 49.1 | 2.0 | 5000.0 | -2.4 |
| pfu_aug2.0_5.1_16683.t3 | 4 | 2 | Ank | 133 | 166 | 2.3e-13 | 49.1 | 4.7e-07 | 0.0012 | 18.5 |
| pfu_aug2.0_5.1_16683.t3 | 3 | 1 | Ank_3 | 133 | 164 | 6.1e-08 | 32.1 | 0.00016 | 0.38 | 11.1 |
| pfu_aug2.0_5.1_16683.t3 | 3 | 2 | Ank_4 | 149 | 191 | 5.1e-16 | 58.7 | 7.9e-10 | 1.9e-06 | 28.1 |
| pfu_aug2.0_5.1_16683.t3 | 3 | 3 | Ank_5 | 170 | 211 | 1.7e-12 | 47.1 | 1.8e-09 | 4.4e-06 | 26.7 |
| pfu_aug2.0_5.1_16683.t3 | 3 | 3 | Ank_4 | 171 | 223 | 5.1e-16 | 58.7 | 9.1e-08 | 0.00023 | 21.6 |
| pfu_aug2.0_5.1_16683.t3 | 4 | 3 | Ank | 171 | 194 | 2.3e-13 | 49.1 | 2.8e-09 | 7.0e-06 | 25.5 |
| pfu_aug2.0_5.1_16683.t3 | 3 | 2 | Ank_3 | 171 | 195 | 6.1e-08 | 32.1 | 1.6e-06 | 0.0041 | 17.2 |
| pfu_aug2.0_5.1_16683.t3 | 2 | 2 | Ank_2 | 207 | 232 | 1.9e-14 | 53.7 | 0.0073 | 18.0 | 5.7 |
| pfu_aug2.0_5.1_16683.t3 | 4 | 4 | Ank | 211 | 226 | 2.3e-13 | 49.1 | 0.19 | 470.0 | 0.8 |
| pfu_aug2.0_5.1_16683.t3 | 3 | 3 | Ank_3 | 214 | 223 | 6.1e-08 | 32.1 | 1.7 | 4300.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5.1_16683.t3 | gi|123977109|ref|XP_001330727.1| | ankyrin repeat protein [Trichomonas vaginalis G3] | 2.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_5.1_16683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16683.t1 atgttaccccacgtgagtgttcgatttgaacaaaagtggttatggtacatacttccaccacctaaaccacgtgacaggaa tgatggtaatgacacgtcagttgtaagacctaaaaaggaggaaagaagagaagcaagaagtcctgatccacctccggatc ctgttccggggccatccgtgcgcattgttgaaccggaaggaagtgataatgaaatggatcatcctccccccgtaatgaac aacgaggacatcccggaggacgaggctgagaaacgtattcatccacggaaaaagaaaacagcttctattatagagactgt tgaactaggtgacgatgacgaattagcacttattctgaatgacccggatgcagatctgaatgtgccaaatgagtccggtt tatatcccattcacattgctgtaatgagagatgaccccacacagaggaaccagcttgtacaacggctgatcaatgaggga gctgacatcaatgtcagggccataccgcatgcgagccatgatgagagtggaaacactcctctgcacatggctgtagcacg tgaccaagtgggtacagtaaagttactactctcccataacccagcttactccgtcccaaatgcggatggtcttacgccaa aagaaatcgctgaaaataatggcaacatagaaatcatgcaactcctagaagactacaaacgctcggttgacaagaataag aacaaaagcaaaggaggtgtttgtgtcattctttga |
|
| Transcript ID | pfu_aug2.0_5.1_16683.t2 |
| Definition | - |
>pfu_aug2.0_5.1_16683.t2 atgttaccccacgtgagtgttcgatttgaacaaaagtggttatggtacatacttccaccacctaaaccacgtgacaggaa tgatggtaatgacacgtcagttgtaagacctaaaaaggaggaaagaagagaagcaagaagtcctgatccacctccggatc ctgttccggggccatccgtgcgcattgttgaaccggaaggaagtgataatgaaatggatcatcctccccccgtaatgaac aacgaggacatcccggaggacgaggcttctattatagagactgttgaactaggtgacgatgacgaattagcacttattct gaatgacccggatgcagatctgaatgtgccaaatgagtccggtttatatcccattcacattgctgtaatgagagatgacc ccacacagaggaaccagcttgtacaacggctgatcaatgagggagctgacatcaatgtcagggccataccgcatgcgagc catgatgagagtggaaacactcctctgcacatggctgtagcacgtgaccaagtgggtacagtaaagttactactctccca taacccagcttactccgtcccaaatgcggatggtcttacgccaaaagaaatcgctgaaaataatggcaacatagaaatca tgcaactcctagaagactacaaacgctcggttgacaagaataagaacaaaagcaaaggaggtgtttgtgtcattctttga |
|
| Transcript ID | pfu_aug2.0_5.1_16683.t3 |
| Definition | - |
>pfu_aug2.0_5.1_16683.t3 atgttaccccacgtgagtgttcgatttgaacaaaagtggttatggtacatacttccaccacctaaaccacgtgacaggaa tgatggtaatgacacgtcagttgtaagacctaaaaaggaggaaagaagagaagcaagaagtcctgatccacctccggatc ctgttccggggccatccgtgcgcattgttgaaccggaaggaagtgataatgaaatggatcatcctccccccgtaatgaac aacgaggacatcccggaggacgaggctgagaaacgtattcatccacggaaaaagaaaacagcttctattatagagactgt tgaactaggtgacgatgacgaattagcacttattctgaatgacccggatgcagatctgaatgtgccaaatgagtccggtt tatatcccattcacattgctgtaatgagagatgaccccacacagaggaaccagcttgtacaacggctgatcaatgaggga gctgacatcaatgtcagggccataccgagtggaaacactcctctgcacatggctgtagcacgtgaccaagtgggtacagt aaagttactactctcccataacccagcttactccgtcccaaatgcggatggtcttacgccaaaagaaatcgctgaaaata atggcaacatagaaatcatgcaactcctagaagactacaaacgctcggttgacaagaataagaacaaaagcaaaggaggt gtttgtgtcattctttga |
|
Protein
| Protein ID | pfu_aug2.0_5.1_16683.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16683.t1 MLPHVSVRFEQKWLWYILPPPKPRDRNDGNDTSVVRPKKEERREARSPDPPPDPVPGPSVRIVEPEGSDNEMDHPPPVMN NEDIPEDEAEKRIHPRKKKTASIIETVELGDDDELALILNDPDADLNVPNESGLYPIHIAVMRDDPTQRNQLVQRLINEG ADINVRAIPHASHDESGNTPLHMAVARDQVGTVKLLLSHNPAYSVPNADGLTPKEIAENNGNIEIMQLLEDYKRSVDKNK NKSKGGVCVIL |
|
| Protein ID | pfu_aug2.0_5.1_16683.t2 |
| Definition | - |
>pfu_aug2.0_5.1_16683.t2 MLPHVSVRFEQKWLWYILPPPKPRDRNDGNDTSVVRPKKEERREARSPDPPPDPVPGPSVRIVEPEGSDNEMDHPPPVMN NEDIPEDEASIIETVELGDDDELALILNDPDADLNVPNESGLYPIHIAVMRDDPTQRNQLVQRLINEGADINVRAIPHAS HDESGNTPLHMAVARDQVGTVKLLLSHNPAYSVPNADGLTPKEIAENNGNIEIMQLLEDYKRSVDKNKNKSKGGVCVIL |
|
| Protein ID | pfu_aug2.0_5.1_16683.t3 |
| Definition | - |
>pfu_aug2.0_5.1_16683.t3 MLPHVSVRFEQKWLWYILPPPKPRDRNDGNDTSVVRPKKEERREARSPDPPPDPVPGPSVRIVEPEGSDNEMDHPPPVMN NEDIPEDEAEKRIHPRKKKTASIIETVELGDDDELALILNDPDADLNVPNESGLYPIHIAVMRDDPTQRNQLVQRLINEG ADINVRAIPSGNTPLHMAVARDQVGTVKLLLSHNPAYSVPNADGLTPKEIAENNGNIEIMQLLEDYKRSVDKNKNKSKGG VCVIL |
|