Gene
| Gene Model ID | pfu_aug2.0_5.1_16692 |
|---|---|
| Locus | scaffold5.1 : 964323 ... 967230 : - |
| To GenomeBrowser | scaffold5.1:964323..967230 |
| Genes list of scaffold | scaffold5.1 |
| Synonym | pfu_aug1.0_38877.1_55686 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5.1_16692.t1 | 1 | 1 | RVT_1 | 16 | 65 | 4.0e-08 | 32.8 | 1.1e-11 | 8.0e-08 | 31.8 |
Transcript
| Transcript ID | pfu_aug2.0_5.1_16692.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16692.t1 atgcgtgacagtctagaaggcatagaaggcatccgaaacttaagtgatgatattatcgtacatgcgaaaactcaagagga gctcgatgattgtttgaaggctaccctgcaaagattgcgtgaaaggaacattacattaaacaagtcgaaatgcaaattca atcgagacaaagttgagttctttggatacgtcttttcaaacaaaggattgtcagcagatccaaggaacataactgcgatt aaagaagcgaaaccaccagcgaacgtgtccgagttacgtagtttccttggactggctaattatgtatctcgtttcatacc cgactttgcgagtatagttgctccgttacgtaccttaacacacaaaaatgtcacatggagatggggaaaagtagaaaatg aagcgttcaagaagctgaaaaacagtttgatagaagatgttatggaatattttgacccgtctaaacagtcaaaattagtg gtagatgcatccccagtaggattaggtgcaattttgatgcaggaagggaaagttatttcgtacgcaagtaaaacgttgtc agacgtagaatctggttactcacagacagaaaaagaggctttagcgatagtttgtggctgtgagcattatcatctttact tgtatggaagctcatttatgttatacacggaccataagcctttggaagtaatttttaataaccccaaaagccgtccacca gcgagaatagaacgttggcgtttaaggttacaaccttatgacttcatagttaaataccgaccaggaaccgaaaatccagc agatttcatgtctagacaactgatcgactctattgatagcaaaagtcagaggcattcgaaagttgcagaggaatatctta gtttcatagtggaacaaacgactccgaaagctatgacactgtctgagatatctgttgccacaaaacaggacagagttcta caaaacgcaatgaactgtctagttaaaggaaattggagttcagttgactcaacaagtgaaacttatccatatttgagagt caaagagcagcttagtattgcaacagttcaggaaggaagcattctattattcgatacacgcatagtagtaccgaagcagt ttcaacaacgagttgtgaatttggctcatgaagcgagtacacattctaataatgttgaaccgcttaaaatgacaaagatt ccagaaagaccatggactcatctgtcagcagacttttgtggaccgttttcctcaggagagtacttagcaacccctcacag tacaacgtcaatatcgcccgcggaagctctgttaggccgcaaacttcaaacaaagctacccgaactaccaaaatctcaac cgaaagtgcaaaagagcatagttgttcaagatgaccaacgcaaaagtgcaatgaaggaagattctgatctccgtaataat gcaaaagaaagtgagctgaaggaaagtgatttcgtactagtcaaacaaccgcacaaagacaagctgtctacgccgtttaa cccaaaaccgctatgtgtcacagacaaaaaaggaagtatgatcacagcagaagatgaatcaggtcataaaatcacacgaa attcatcattcttcaaaaaagtcgaaggaatgagatcactcccgaaatttgaaccagctcaggaagaagaagacgaattt gaagtcactatgaatgaagtttccgtaccgactccaaataaaacttcaactccgaaccagatcagtaaacgtccaatccg aagtaccaagcatccagcatatctaagtgattatgttacgtaa |
|
Protein
| Protein ID | pfu_aug2.0_5.1_16692.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5.1_16692.t1 MRDSLEGIEGIRNLSDDIIVHAKTQEELDDCLKATLQRLRERNITLNKSKCKFNRDKVEFFGYVFSNKGLSADPRNITAI KEAKPPANVSELRSFLGLANYVSRFIPDFASIVAPLRTLTHKNVTWRWGKVENEAFKKLKNSLIEDVMEYFDPSKQSKLV VDASPVGLGAILMQEGKVISYASKTLSDVESGYSQTEKEALAIVCGCEHYHLYLYGSSFMLYTDHKPLEVIFNNPKSRPP ARIERWRLRLQPYDFIVKYRPGTENPADFMSRQLIDSIDSKSQRHSKVAEEYLSFIVEQTTPKAMTLSEISVATKQDRVL QNAMNCLVKGNWSSVDSTSETYPYLRVKEQLSIATVQEGSILLFDTRIVVPKQFQQRVVNLAHEASTHSNNVEPLKMTKI PERPWTHLSADFCGPFSSGEYLATPHSTTSISPAEALLGRKLQTKLPELPKSQPKVQKSIVVQDDQRKSAMKEDSDLRNN AKESELKESDFVLVKQPHKDKLSTPFNPKPLCVTDKKGSMITAEDESGHKITRNSSFFKKVEGMRSLPKFEPAQEEEDEF EVTMNEVSVPTPNKTSTPNQISKRPIRSTKHPAYLSDYVT |
|