Gene
| Gene Model ID | pfu_aug2.0_50.1_00120 |
|---|---|
| Locus | scaffold50.1 : 1 ... 20055 : - |
| To GenomeBrowser | scaffold50.1:1..20055 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_4593.1_67027 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00120.t1 | 4 | 1 | XPG_I_2 | 115 | 281 | 1.0e-32 | 113.5 | 1.4e-24 | 7.1e-21 | 74.8 |
| pfu_aug2.0_50.1_00120.t1 | 4 | 2 | XPG_I_2 | 363 | 421 | 1.0e-32 | 113.5 | 0.00013 | 0.62 | 9.4 |
| pfu_aug2.0_50.1_00120.t1 | 4 | 3 | XPG_I_2 | 699 | 825 | 1.0e-32 | 113.5 | 7.7e-10 | 3.8e-06 | 26.5 |
| pfu_aug2.0_50.1_00120.t1 | 4 | 4 | XPG_I_2 | 1001 | 1056 | 1.0e-32 | 113.5 | 0.44 | 2200.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00120.t1 | gi|260834821|ref|XP_002612408.1| | hypothetical protein BRAFLDRAFT_218990 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_50.1_00120.t1 | gi|241061113|ref|XP_002408059.1| | conserved hypothetical protein [Ixodes scapularis] | 0.0 |
| pfu_aug2.0_50.1_00120.t1 | gi|632967284|ref|XP_007899893.1| | PREDICTED: protein asteroid homolog 1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_50.1_00120.t1 | gi|557004892|ref|XP_006004259.1| | PREDICTED: protein asteroid homolog 1 isoform X1 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_50.1_00120.t1 | gi|189230326|ref|NP_001121487.1| | protein asteroid homolog 1 [Xenopus (Silurana) tropicalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00120.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00120.t1 atggggatttcaggactgacaacctttatggatgataatctacatctatttatggagcacagattacagaatacgaagat catcattgacggcaacaacttgtaccatctactgtactatgacaataacgtggatcatgtacatggcggagattatgaca gatttgctgagaagacgagggagtttttcacaatgctctcatcatgcggaatctccccatatctggtgtttgatggtgcg tacgaggtggatgatagaaagttaaacacggtattagataggttcagaaagaggctgttcagcgctcatacaatagctaa aggtggaggtgctaaaatactgccgatcttagcttacgaaaccttcagacaagttctgaatgccatgaaggtgccatttg ttgtctctgattttgaggcagactatgacattgcggttttagcaaatcattttgaatgccctgtactgtcgtatgatagt gacttctacattctgcctctctcagcgggatttataccttttgatagcgtgaatttctcaatacaagctgatgaaaatga caaatctcaaaaatatttattgtgtaggatatattttgtggataagttaactaaacattttcctaacttaggcagagatt tgctgccgcttctggcaaccttgatgggaaatgattacattgaatcatctacattcgaaactttcatcgcaaggcttcca actccaaaggagtcaaattctcatttcagaattccgaagacgaaaaccagaatgctgaaatatatgaactggttggagaa tactggaagcttgaaaggagcagtggagagtattgtggcttcagaaaagactgtaaatcaggagaaacttagacatcaga ttgagaggtctttacaagcattcacactgacagaagacggcagtgctcatgctttagttgagtatttaagaaatacagat gtagctgacagatctactcatgtagatggatatgatggttgtaaatttcatgtcccagattggctgaaatttgcacatag gtctggtgatgtagtgatggcattgaaaaatatcttgttgtcaagacggacattcctacaatgccaagttgaggacgtca ggttgccaacttcttatgcttgctcacagaaaattcgagaagttacttatggcatcttactgtctgaagaacttgaggac aaagcatcaaaatgtgtccaagagtatgatagggaagtaaaaaacatcaagaaaaatatgatcgaacctgactcgcaagc agtcaaagtctctgaagttcccaaattgagtgttgaaggaagacaagccatactgatgcatacgctaagagtggattctg aagatttcaccaggaactgttcaggggtagaattacttgtgtgtgttatagctcactggatattgaatgcaacaccaaag attacccaggatcatttaaagtctctcctggttgcgaagcaaatccggtctatgaaatggcgaagtccgcgtctttctgt ccgtccgccagccctccgtccgtttttgtgcttcaacatttttggggaagctgttacgttatgtgaagggatggacaggg aagggagggagagacggggaagggtgctggaggaggggggccggaggatggaggtgtgcgcaatgtcgggaatacgagga atcacattttttcttaataacaatcctcaactccttcatgaatacaagttgcatgacggcaagatagttttaataggaaa tatgttacaaaatctcatcctggatagaggagaagaaacacgcgaatgcggaggcgattacttggaatacaccagaacat tgtttcatttcttttcaaagttacaacaatgtcacgtgactccttacgtcatcattttaggtgacgatcatcaagacgaa gagatgaaacgtaagaaacaaatgaagataatggaagagcaagtccagttcctcgagaacaggaaacggaagaaaataag accgatgttaacacatgaaacatttcgtcatgtaattcattccttaaacctgccattttttgtacagcacgtgagagatt taagagaggtagtgaaattggcaaatgatctgaactgccccgtgctatgtcaagttcctgatttctatgcctatccactg aaagccggcttcataccattcaaaagtctgaattggcaagtacaagaggaacaatcagcagatgatacttcctctcacaa gttcttaccttgcagaatttaccatgctgaaaatctaaccaagaatttcccacgtttaggaaatgatgctttagttgcta tgtcaattttactggggaacgactttctggaaaagcacgacattagggagtttcatgagaaaatacaaaagaatccaact cagaataatttacatctgaaattcaatccaaaatatccagcgataatgaaattaatgaactggcttgcacaacagaataa tttacaaagtattagggagggagtactgggttgtcttaccttaaacaaagagaaagcaagggaatcaatcaccaagtcca tagatcgttatggattagattcaattaaacacacacagcctctgattgaatatttccaaggaattcaaaaataccatcaa gtgaaaactgcacctggcgtaccggaatggcttacattgatgtatcaaagaggagaaatcagcgttgttattccacgtgg gcagattgaggagatatacagagaaaaacgctcagtgaaatctgtccatgtcgatcccgccaaggaaacaccgagtcttc aagatattccactcttggacaagtacttacgaaaacggatcatactagatacactcaagaaaaccaatagaaacgttgct ttgtctgcagatacagaattttttacagccatcattgaatactgtttagaaaacagcaatccaaaacttaatgagcatca cgcacgagcgttgatatgctgtttcctcgtcatgaatgtgaaatttgagtctcttctgagtcggaccgaagacagatcag cgattcaagaaatgtataggatgtcagcacattccatcgtaaatctggaagaaaagtgggaacctctatgtcaacatcat gaccaggagtacgacatacatgttattcacgcctttgcccagtttcaggcttgtttcctggcagcacttgatttgaacca gctgttgctttgtccgtttccgaatcttaatccagcaagagtcattcacggtacatttttgcataatgtcttcataaagc taacgacgagtacctcttcaaaaccagtgatagaggacttgtttgatcgaaatcaatgctttcttgtaatgttcagcaag atggaatccgcggtgttaggtcctcttgtcctttacagtagagcaaccgagtcgcttaattag |
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Protein
| Protein ID | pfu_aug2.0_50.1_00120.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00120.t1 MGISGLTTFMDDNLHLFMEHRLQNTKIIIDGNNLYHLLYYDNNVDHVHGGDYDRFAEKTREFFTMLSSCGISPYLVFDGA YEVDDRKLNTVLDRFRKRLFSAHTIAKGGGAKILPILAYETFRQVLNAMKVPFVVSDFEADYDIAVLANHFECPVLSYDS DFYILPLSAGFIPFDSVNFSIQADENDKSQKYLLCRIYFVDKLTKHFPNLGRDLLPLLATLMGNDYIESSTFETFIARLP TPKESNSHFRIPKTKTRMLKYMNWLENTGSLKGAVESIVASEKTVNQEKLRHQIERSLQAFTLTEDGSAHALVEYLRNTD VADRSTHVDGYDGCKFHVPDWLKFAHRSGDVVMALKNILLSRRTFLQCQVEDVRLPTSYACSQKIREVTYGILLSEELED KASKCVQEYDREVKNIKKNMIEPDSQAVKVSEVPKLSVEGRQAILMHTLRVDSEDFTRNCSGVELLVCVIAHWILNATPK ITQDHLKSLLVAKQIRSMKWRSPRLSVRPPALRPFLCFNIFGEAVTLCEGMDREGRERRGRVLEEGGRRMEVCAMSGIRG ITFFLNNNPQLLHEYKLHDGKIVLIGNMLQNLILDRGEETRECGGDYLEYTRTLFHFFSKLQQCHVTPYVIILGDDHQDE EMKRKKQMKIMEEQVQFLENRKRKKIRPMLTHETFRHVIHSLNLPFFVQHVRDLREVVKLANDLNCPVLCQVPDFYAYPL KAGFIPFKSLNWQVQEEQSADDTSSHKFLPCRIYHAENLTKNFPRLGNDALVAMSILLGNDFLEKHDIREFHEKIQKNPT QNNLHLKFNPKYPAIMKLMNWLAQQNNLQSIREGVLGCLTLNKEKARESITKSIDRYGLDSIKHTQPLIEYFQGIQKYHQ VKTAPGVPEWLTLMYQRGEISVVIPRGQIEEIYREKRSVKSVHVDPAKETPSLQDIPLLDKYLRKRIILDTLKKTNRNVA LSADTEFFTAIIEYCLENSNPKLNEHHARALICCFLVMNVKFESLLSRTEDRSAIQEMYRMSAHSIVNLEEKWEPLCQHH DQEYDIHVIHAFAQFQACFLAALDLNQLLLCPFPNLNPARVIHGTFLHNVFIKLTTSTSSKPVIEDLFDRNQCFLVMFSK MESAVLGPLVLYSRATESLN |
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