Gene
| Gene Model ID | pfu_aug2.0_50.1_00121 |
|---|---|
| Locus | scaffold50.1 : 21906 ... 52846 : + |
| To GenomeBrowser | scaffold50.1:21906..52846 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_47579.1_70610 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| l-fucose kinase | GO:0016740 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00121.t1 | 2 | 1 | Fucokinase | 95 | 161 | 3.1e-33 | 114.9 | 1.8e-12 | 6.5e-09 | 34.8 |
| pfu_aug2.0_50.1_00121.t1 | 2 | 2 | Fucokinase | 206 | 352 | 3.1e-33 | 114.9 | 1.2e-25 | 4.6e-22 | 78.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00121.t1 | gi|524898555|ref|XP_005105725.1| | PREDICTED: L-fucose kinase-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_50.1_00121.t1 | gi|676468606|ref|XP_009058263.1| | hypothetical protein LOTGIDRAFT_217536 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_50.1_00121.t1 | gi|694964505|ref|XP_009429453.1| | PREDICTED: L-fucose kinase isoform X2 [Pan troglodytes] | 0.0 |
| pfu_aug2.0_50.1_00121.t1 | gi|556999240|ref|XP_006002663.1| | PREDICTED: L-fucose kinase [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_50.1_00121.t1 | gi|632975066|ref|XP_007904022.1| | PREDICTED: L-fucose kinase [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00121.t1 atgtgttcagctgtgaaatggacatccattgttttgacctgtgcaaataaagaatgggtccacccactccaaagagaact ggaaagaaggcagtctttgggtcagattgccaaggatgttctcctattgacagtagaggatccaaggagtaacgtaggga gtggtggggccaccataaatgcacttctcacagtgacggagcatctatctgctaattgtggatactctgttatcaatcca gatgtgctgaaagattcaaagattcttatttgtcatagtggaaggagttatccctatgatccctgcggcagggcgtttct tactctcccttcctccatcgttaaccctgattatgatggtttgatctgtaacttggacattcttatcagaaacatatcag aaaagttagctttgaaatctggagcagggatatgggtgtgcagtacagatatgattctctccattccaaaatctgcaggt atgttggagacaggtgattttcactacttggccagtgagctgaatgaacataagaaagccctcatcagctcaccattaca gagtaacttctctaaatcagtgttttcttggtccaatcaaactcactcatacataagtagttcatgtaaagtgggagagg agtgtgttagtattaacagtgtaatacggggcaacgtcaactttgcccctaaatctgttatatgtcactctagcttaaac gggtcaatagaggttggcagggagacatatgtagggggcataactatagaacacatgaaaagaaaggctcttaaaatagc agaaaacatggtcgtacaaggctttcacattcacatcaaaactctgaataaaactgtccaagttttaacaacgcatggaa aattcgacaaaattgaggctcctatgtggaaatcgtccagtacattctgtaacatgacatgggtgatcatgctgaatgct acagggatactgaaagaagatttgtggggaacagatgtggctgatgatgatcagaacatactgaatgccaaacttttccc tgtgttccatgcaacggacccgatcggaatgcacgagatactgtggttacagggacagacagaggagagagaaaatgcag aaatactacatagatggagatcttcatggcgattatcactaaaggaaatcctcagctttgtgaatatcgaagaagaattc cagaggaaaagggagttattttatgaggtcaaaaagcatgagatttgtacagccctgaagcagagagaaaatcgtggatt tagagctatttataacagtgcaagaatagacggcttctccagtgctttgctgaatacactggatgcaggtgagttggaga gaggtattgaagccatgactaaggagcgtgctaactggatacacagatcagatctgctaatccgagcagcacggcattat gagggggcggcacaaatcctcatcagacaggctgtaatgacggcgaaaacattcttcaaacccaagaagcacaatatgcc attcattaacaagtgggtgacagctacatgcccggcaaggatagatgtttctgggggatggtcagacacgcctcctatca cgtacgaacacggaggggctgtaactacagtggccttacaagttaatggtcagaaaccagtcggagcaaaagctaagaga attgatgaacctaagatagtactagtgatatgtggaaataatgttgacaacacaacagtggagtgtaaggaactcagtga cctagaagattactataacccacacagtccaggtatgggaactagtagcatacttgcgggtgctgtcatggcagccttac tgagggcttctgggaaggaatgtgacactaatggacttatacacgctgtgttatacctagagcagctgttgacgacaggt gggggatggcaggaccaggtggggggactgactggtggtatcaagatagggctgtctgagtctaaactgcccatatctgt ggaggcggtcgaccttaaagtgtccgagaaaaccatccaagctctgaacgaaaggctggtcctaatatatacaggcaaaa ccaggctagctaaaaacctactacaggaggttgtaaggaactggtacgcaaggaatcctcagatagtagaaacagaggat gcattagtcgttctagctcaggaatgtgcccacgcctttatagatggcgaccttaagaaggtagggaagtgcttggacag atactggattatgaagaagattatggctcctgggtgtgagacagagagtatagctaacctgatgaccgcggctcgcccgt tctcttacggcatgtgcgaccttaagaaggtagggaagtgcttggacagatactggattatgaagaagattatggctcct gggtgtgagactgagagtatagctaacctgatgaccgcggctcgcccgttctcttacggcatgtgtatggcaggggcagg tggagggggattcctgtatgtactgaccaaggacaaggaccataaaaaactcctgttagatatactacccaccatagagg tatctgacataaaagcatag |
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Protein
| Protein ID | pfu_aug2.0_50.1_00121.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00121.t1 MCSAVKWTSIVLTCANKEWVHPLQRELERRQSLGQIAKDVLLLTVEDPRSNVGSGGATINALLTVTEHLSANCGYSVINP DVLKDSKILICHSGRSYPYDPCGRAFLTLPSSIVNPDYDGLICNLDILIRNISEKLALKSGAGIWVCSTDMILSIPKSAG MLETGDFHYLASELNEHKKALISSPLQSNFSKSVFSWSNQTHSYISSSCKVGEECVSINSVIRGNVNFAPKSVICHSSLN GSIEVGRETYVGGITIEHMKRKALKIAENMVVQGFHIHIKTLNKTVQVLTTHGKFDKIEAPMWKSSSTFCNMTWVIMLNA TGILKEDLWGTDVADDDQNILNAKLFPVFHATDPIGMHEILWLQGQTEERENAEILHRWRSSWRLSLKEILSFVNIEEEF QRKRELFYEVKKHEICTALKQRENRGFRAIYNSARIDGFSSALLNTLDAGELERGIEAMTKERANWIHRSDLLIRAARHY EGAAQILIRQAVMTAKTFFKPKKHNMPFINKWVTATCPARIDVSGGWSDTPPITYEHGGAVTTVALQVNGQKPVGAKAKR IDEPKIVLVICGNNVDNTTVECKELSDLEDYYNPHSPGMGTSSILAGAVMAALLRASGKECDTNGLIHAVLYLEQLLTTG GGWQDQVGGLTGGIKIGLSESKLPISVEAVDLKVSEKTIQALNERLVLIYTGKTRLAKNLLQEVVRNWYARNPQIVETED ALVVLAQECAHAFIDGDLKKVGKCLDRYWIMKKIMAPGCETESIANLMTAARPFSYGMCDLKKVGKCLDRYWIMKKIMAP GCETESIANLMTAARPFSYGMCMAGAGGGGFLYVLTKDKDHKKLLLDILPTIEVSDIKA |
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