Gene
| Gene Model ID | pfu_aug2.0_50.1_00125 |
|---|---|
| Locus | scaffold50.1 : 110782 ... 111845 : - |
| To GenomeBrowser | scaffold50.1:110782..111845 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_1353.1_58452 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00125.t1 | 1 | 1 | AIG1 | 16 | 156 | 5.8e-17 | 61.5 | 1.1e-20 | 8.0e-17 | 61.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00125.t1 | gi|658869563|ref|XP_008417703.1| | PREDICTED: GTPase IMAP family member 7-like, partial [Poecilia reticulata] | 3.0e-10 |
| pfu_aug2.0_50.1_00125.t1 | gi|658924633|ref|XP_008401979.1| | PREDICTED: GTPase IMAP family member 7-like, partial [Poecilia reticulata] | 3.0e-10 |
| pfu_aug2.0_50.1_00125.t1 | gi|617464706|ref|XP_007573259.1| | PREDICTED: GTPase IMAP family member 8-like [Poecilia formosa] | 4.0e-10 |
| pfu_aug2.0_50.1_00125.t1 | gi|548535741|ref|XP_005702096.1| | PREDICTED: GTPase IMAP family member 7-like, partial [Capra hircus] | 4.0e-10 |
| pfu_aug2.0_50.1_00125.t1 | gi|548554635|ref|XP_005755778.1| | PREDICTED: GTPase IMAP family member 7-like, partial [Pundamilia nyererei] | 8.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00125.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00125.t1 atgcaaatcattccagtattcggagaagctcctgggctagtgtccaatcatctagttggagagaaacgcttcaaaagcgg tcaagctggacctgtggcatcagcaacatatgcctctgctacaatcttagggaaacaattactggtggtaaatatgtcaa gtttgtcggacactacgtctccaaataccgcatcaacagaaattgcgaaatgcaatgaattaacatctctcggagtggat ttaatactttatgtcgtagaaataagtcgttacagcagggaagagtcaaaggcattagacgacatcttggatgcttatgg tcatggggtcgaggaatacgtcatggttgtttttgtaggtacagaacggttactgtctcatggcctgacactgcctcagt ttgtagaaacttttgacgatacctcaactttaaagaagttttttaagaagtataaaaaccaccttgttttccccaccacc gaaatttatgcaacagaacctgttcgagctattttgcaagaaatcgaaacaagaggtaaccagcctttgtcaatacattg gccagtaaacaaagaaaaatcaaacgtctgcactgaaaatgacgatccaaacgccacaggaaagtcaaaacgaggccgtc aagcagacgagatcctcaacttcgggagatctgttttttcatga |
|
Protein
| Protein ID | pfu_aug2.0_50.1_00125.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00125.t1 MQIIPVFGEAPGLVSNHLVGEKRFKSGQAGPVASATYASATILGKQLLVVNMSSLSDTTSPNTASTEIAKCNELTSLGVD LILYVVEISRYSREESKALDDILDAYGHGVEEYVMVVFVGTERLLSHGLTLPQFVETFDDTSTLKKFFKKYKNHLVFPTT EIYATEPVRAILQEIETRGNQPLSIHWPVNKEKSNVCTENDDPNATGKSKRGRQADEILNFGRSVFS |
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