Gene
| Gene Model ID | pfu_aug2.0_50.1_00127 |
|---|---|
| Locus | scaffold50.1 : 154701 ... 170175 : - |
| To GenomeBrowser | scaffold50.1:154701..170175 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_1353.1_58449 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| core-binding factor subunit beta isoform x1 | GO:0001503 GO:0003713 GO:0005488 GO:0005634 GO:0030097 GO:0030239 GO:0044422 GO:1903506 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00127.t1 | 1 | 1 | CBF_beta | 1 | 171 | 0.0 | 258.9 | 0.0 | 0.0 | 258.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00127.t1 | gi|676469281|ref|XP_009058481.1| | hypothetical protein LOTGIDRAFT_163713 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_50.1_00127.t1 | gi|524870726|ref|XP_005092145.1| | PREDICTED: protein big brother-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_50.1_00127.t1 | gi|269785127|ref|NP_001161519.1| | core binding factor beta subunit [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_50.1_00127.t1 | gi|585665692|ref|XP_006816982.1| | PREDICTED: core binding factor beta subunit isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_50.1_00127.t1 | gi|543366046|ref|XP_005526382.1| | PREDICTED: core-binding factor subunit beta [Pseudopodoces humilis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00127.t1 atgccccgagtggtgccggatcaaagatcgacttttgaaaacgacgaacttttcaggaaattaagcagagaatgtgaggt aaagtacactggttttagggatagacccacagaggaaaggcagctgagatttcaaacagaatgtagggagggtcacgctg atgtggctttcgtagcaacaggaaccaatttaaatttattatttgaatcaaatgcatggtcagagagggatgaagataga gtggtgaccagggaatatgtagactttgacagggaacctggaaaggtccatttaaagtcccgttttataatgaatggagt ttgtgtggtgtggagaggctggctagatttacagaggttagatggggtaggctgtatggaattcgactcagaacgagccg aggttgaggatgccttatatagagaacagagagatgagtacaatcggagattacgagactttccggacatacagcggcaa tatcgagagcagcaagagcgtcgcgaccaggaagcagaggtagtggaggctttgttgtgtatatctgaggatcgtaaatc gtaa |
|
Protein
| Protein ID | pfu_aug2.0_50.1_00127.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00127.t1 MPRVVPDQRSTFENDELFRKLSRECEVKYTGFRDRPTEERQLRFQTECREGHADVAFVATGTNLNLLFESNAWSERDEDR VVTREYVDFDREPGKVHLKSRFIMNGVCVVWRGWLDLQRLDGVGCMEFDSERAEVEDALYREQRDEYNRRLRDFPDIQRQ YREQQERRDQEAEVVEALLCISEDRKS |
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