Gene
| Gene Model ID | pfu_aug2.0_50.1_00128 |
|---|---|
| Locus | scaffold50.1 : 196302 ... 203918 : + |
| To GenomeBrowser | scaffold50.1:196302..203918 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_1353.1_58448 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| upf0183 protein c16orf70 homolog | GO:0005802 GO:0030425 GO:0030672 GO:0035254 GO:0043001 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00128.t1 | 1 | 1 | UPF0183 | 1 | 125 | 0.0 | 186.7 | 0.0 | 0.0 | 186.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00128.t1 | gi|524870617|ref|XP_005092092.1| | PREDICTED: UPF0183 protein C16orf70 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_50.1_00128.t1 | gi|676469275|ref|XP_009058479.1| | hypothetical protein LOTGIDRAFT_217685 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_50.1_00128.t1 | gi|677978030|ref|XP_009072861.1| | PREDICTED: UPF0183 protein C16orf70 homolog, partial [Acanthisitta chloris] | 0.0 |
| pfu_aug2.0_50.1_00128.t1 | gi|704468047|ref|XP_010086151.1| | PREDICTED: UPF0183 protein C16orf70 homolog [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_50.1_00128.t1 | gi|701297970|ref|XP_010009298.1| | PREDICTED: UPF0183 protein C16orf70 homolog, partial [Nestor notabilis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00128.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00128.t1 atgggattggacgtactgttcgatgctaatactcatcaagtcaaaaagttcatcctccatacaaattttcctggtcatta taacttcaatatgtactgtcgttgtgaattcaaactaccagtcgtggtggattcagtaaaaccaaagtcagcacagctag tatcaacatctgatgatgatgtcattattacagcttattctaagtgggacagtgtgcaaaagtacctagtaaaaccagaa cagagacccgtcatccttaacaggtcctcatctaccaacaccagtaatccttttggatctactttctgttttggagttca agatcttatatttgaggtgatgcagaatcagcatatagcctcggtgacattatacaaaccaaaaatgccgtcatctacca gcaaggagccatcttga |
|
Protein
| Protein ID | pfu_aug2.0_50.1_00128.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00128.t1 MGLDVLFDANTHQVKKFILHTNFPGHYNFNMYCRCEFKLPVVVDSVKPKSAQLVSTSDDDVIITAYSKWDSVQKYLVKPE QRPVILNRSSSTNTSNPFGSTFCFGVQDLIFEVMQNQHIASVTLYKPKMPSSTSKEPS |
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