Gene
| Gene Model ID | pfu_aug2.0_50.1_00131 |
|---|---|
| Locus | scaffold50.1 : 232245 ... 235281 : - |
| To GenomeBrowser | scaffold50.1:232245..235281 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_1353.1_58445 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 26s proteasome non-atpase regulatory subunit 10 | GO:0005198 GO:0006888 GO:0006996 GO:0007165 GO:0008093 GO:0014731 GO:0030507 GO:0031323 GO:0044260 GO:0044444 GO:0044459 GO:0048468 GO:0048522 GO:0048523 GO:0048731 GO:0051117 GO:0060255 GO:0065008 GO:0072661 GO:0080090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00131.t1 | 4 | 1 | Ank_3 | 70 | 79 | 4.9e-15 | 54.1 | 0.62 | 1800.0 | -0.3 |
| pfu_aug2.0_50.1_00131.t1 | 3 | 1 | Ank_4 | 70 | 76 | 2.3e-14 | 53.4 | 3.8 | 11000.0 | -3.0 |
| pfu_aug2.0_50.1_00131.t1 | 4 | 1 | Ank | 71 | 79 | 4.2e-18 | 64.1 | 3.4 | 10000.0 | -3.4 |
| pfu_aug2.0_50.1_00131.t1 | 2 | 1 | Ank_2 | 74 | 177 | 7.9e-32 | 109.4 | 3.0e-19 | 8.9e-16 | 58.0 |
| pfu_aug2.0_50.1_00131.t1 | 3 | 2 | Ank_4 | 105 | 133 | 2.3e-14 | 53.4 | 6.2e-09 | 1.9e-05 | 25.0 |
| pfu_aug2.0_50.1_00131.t1 | 2 | 1 | Ank_5 | 105 | 133 | 4.6e-11 | 42.5 | 7.6e-08 | 0.00023 | 21.3 |
| pfu_aug2.0_50.1_00131.t1 | 4 | 2 | Ank | 106 | 134 | 4.2e-18 | 64.1 | 1.8e-11 | 5.3e-08 | 32.2 |
| pfu_aug2.0_50.1_00131.t1 | 4 | 2 | Ank_3 | 106 | 131 | 4.9e-15 | 54.1 | 1.7e-09 | 5.1e-06 | 26.2 |
| pfu_aug2.0_50.1_00131.t1 | 2 | 2 | Ank_2 | 108 | 200 | 7.9e-32 | 109.4 | 8.9e-19 | 2.6e-15 | 56.5 |
| pfu_aug2.0_50.1_00131.t1 | 2 | 2 | Ank_5 | 136 | 183 | 4.6e-11 | 42.5 | 5.4e-07 | 0.0016 | 18.6 |
| pfu_aug2.0_50.1_00131.t1 | 4 | 3 | Ank | 151 | 179 | 4.2e-18 | 64.1 | 2.1e-09 | 6.2e-06 | 25.7 |
| pfu_aug2.0_50.1_00131.t1 | 4 | 3 | Ank_3 | 151 | 177 | 4.9e-15 | 54.1 | 5.5e-08 | 0.00016 | 21.5 |
| pfu_aug2.0_50.1_00131.t1 | 3 | 3 | Ank_4 | 152 | 200 | 2.3e-14 | 53.4 | 4.7e-09 | 1.4e-05 | 25.4 |
| pfu_aug2.0_50.1_00131.t1 | 4 | 4 | Ank_3 | 186 | 200 | 4.9e-15 | 54.1 | 0.37 | 1100.0 | 0.4 |
| pfu_aug2.0_50.1_00131.t1 | 4 | 4 | Ank | 189 | 200 | 4.2e-18 | 64.1 | 0.082 | 240.0 | 1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00131.t1 | gi|684402268|ref|XP_009173418.1| | hypothetical protein T265_14770, partial [Opisthorchis viverrini] | 9.0e-14 |
| pfu_aug2.0_50.1_00131.t1 | gi|126342042|ref|XP_001363654.1| | PREDICTED: 26S proteasome non-ATPase regulatory subunit 10 [Monodelphis domestica] | 1.0e-12 |
| pfu_aug2.0_50.1_00131.t1 | gi|686630031|ref|XP_009307461.1| | ankyrin [Trypanosoma grayi] | 3.0e-12 |
| pfu_aug2.0_50.1_00131.t1 | gi|213514232|ref|NP_001134506.1| | 26S proteasome non-ATPase regulatory subunit 10 [Salmo salar] | 7.0e-12 |
| pfu_aug2.0_50.1_00131.t1 | gi|147898909|ref|NP_001088704.1| | proteasome (prosome, macropain) 26S subunit, non-ATPase, 10 [Xenopus laevis] | 8.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00131.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00131.t1 atgcccggggagagggataaccgattgtctcagaaatggaaatgtaccttacaagatgaaggatttcagattgttctggc cgaccagcttctagaattacccatttcagagttaaagaatcttctttgtgttattccacaaaatacgtttaaagaaaaat ctacacgacatgggaaaaccagtctagattttggtgtgttaacgagctcaccttttcattggatatgcaaactgggtctc cacaaattatacaccgctgttttgggggaaatgcccgatagagatatatttgttcgaaacatcccgggtcataccagtcc tttacattttgcagctggatttgggcatctggaaattgtaaaaagcctcattgagtttggagctgacgttaattctcgtt caaaactcgaatgcgacgacgactccgtcggtgctcattattattcaagttttacgccaattttctatgctgtgcgtcaa aatcatcttgaagttgccgacttcctcttaagatctggtgcaaacccagacatggtgagagatcagggcgccccaccaac gcttcttgctgctgacaagggtcaccacagaatgatcaagccttacttgactattcggctgacccgaatatttgctgtta ccatgggacgtcgcccttattcagagcatcaaaagaaggacataaggatgccgtccgagtacttatag |
|
Protein
| Protein ID | pfu_aug2.0_50.1_00131.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00131.t1 MPGERDNRLSQKWKCTLQDEGFQIVLADQLLELPISELKNLLCVIPQNTFKEKSTRHGKTSLDFGVLTSSPFHWICKLGL HKLYTAVLGEMPDRDIFVRNIPGHTSPLHFAAGFGHLEIVKSLIEFGADVNSRSKLECDDDSVGAHYYSSFTPIFYAVRQ NHLEVADFLLRSGANPDMVRDQGAPPTLLAADKGHHRMIKPYLTIRLTRIFAVTMGRRPYSEHQKKDIRMPSEYL |
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