Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_50.1_00132
Locus scaffold50.1 : 273412 ... 308349 : +
To GenomeBrowser scaffold50.1:273412..308349
Genes list of scaffold scaffold50.1
Synonym pfu_aug1.0_704.1_65586

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_50.1_00132.t1 2 1 Guanylate_cyc 322 473 3.1e-36 124.4 3.4e-28 5.0e-24 84.6
pfu_aug2.0_50.1_00132.t1 2 2 Guanylate_cyc 854 989 3.1e-36 124.4 1.3e-13 1.9e-09 37.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_50.1_00132.t1 gi|759043990|ref|XP_011330896.1| PREDICTED: adenylate cyclase type 3 [Cerapachys biroi] 0.0
pfu_aug2.0_50.1_00132.t1 gi|242007870|ref|XP_002424741.1| adenylate cyclase type, putative [Pediculus humanus corporis] 5.60519e-45
pfu_aug2.0_50.1_00132.t1 gi|350401220|ref|XP_003486087.1| PREDICTED: adenylate cyclase type 3 [Bombus impatiens] 3.00018e-42
pfu_aug2.0_50.1_00132.t1 gi|340720609|ref|XP_003398726.1| PREDICTED: adenylate cyclase type 3 [Bombus terrestris] 6.99949e-42
pfu_aug2.0_50.1_00132.t1 gi|746840858|ref|XP_011050638.1| PREDICTED: LOW QUALITY PROTEIN: adenylate cyclase type 3 [Acromyrmex echinatior] 8.00001e-42

Transcript
Transcript IDpfu_aug2.0_50.1_00132.t1
Definition-
>pfu_aug2.0_50.1_00132.t1
atgaaagatcaaaagataagcccgcattcaagcacgaggaactccatggaaacgtcttttgttgataggcagcaaagaga
agagccgtatacaaatggagccagcagtcttgatgacgaaaatcaaaattctcgtaatgtttctgtggacgaaacgatga
aaaagaagttccagctgaccaagccatatctaccatggagaagatttgaatcccccaagcaagaaagactttacaaagaa
tacaagcaaagctatatcaagcaagttacaatagtgcctgctgttgcgggtttcgtattctctgtctgttcattcggact
aagcatacatcactttacagacgatagaattgttcccgtcctagtaacctgtgttttcatacttatttttgttgccattg
tcagtattaaaattgcagatgaagttcaggtcgatgacgaccatttcattgcaattagttctgtgatattccttttgatg
aacatgtcttcatcagtgctaatccaggatgacgtaatgattacgtcagagaagaacatccaatggatgatattgttgtt
gtttttgacgtatgtaacagtcccattgtctttctggaagtgcaccgctatcgccttatcaaccatagtcgtcgttatag
ccacccttttggttgtccaagatgatatttcaaacgtagctggaggggagagaccaacagagttggctggaatatgtatc
ttcagtgtatcaggcgttctgattggatcatttgcatatttcttcatcgacattttcttaagaaggacgtttttggacat
acagaattcacacgcaatccaagccaagatgaagagactcaaagaatctcaggacagactattgcattccctgataccac
agtgtatattggacagcgctaacatatataacggtgcttctacagaggaattttacaggaggacgtgtagatattcaaac
tgtaatgcaagcatattattcgcacgattgcatggagtagagcccctcgtgcgaagggacgcgaagatcttcgtcaattt
tatggaagaggtctgcgaaaatttcgacaagctttgcaaaaaattcagttcccatcctatacggtaccttggctgtttgt
tcaagtcagtctgtggtgcaccagaacataatgcaaaccatgcagcaaatgcaatctacctgggcgtggcacttgtcaat
tttataagagagattaaagccaaatacaaaatgaaagagctggacatacgtgtaggtatacacacaggtgaagtagagag
tggaataattggtaaaacacagtggcattttgatgtacttggtagtgcggtagatgtagccagagaaatccaacgcatgg
ctccagcaggacaagttataatttcccattgtacacgacttgagctgagagatgagttcattctggatacttaccaaaag
agagccagttttccctttctccaaataaggaccttcagtgttagatacgtaattcagcagttccagcaatttgacgatat
gaggaacatagtttacagaaggaggagacggaagggagggaccagtgtgttctttcaaagcttcactggaagcactcttg
gcaatgcatcgagacaatcaaacaaagaagagtcggtgacaaagacttgttttaacccatcagcagaagtgccttatagg
agactacagaatcaatactctcacatcggtatattatcactgatagtgttcggtttctgtggcctttgcgtcactctcct
gaccaaggatataaaccaacaagagctatttctctacatatcaggcctggtattcttgatggtagcattaggaacattgg
caatgttgggtagatgcaaaattcagggttctaaaaccacctttgttgtgttcaaagctattcttatagccatagtattg
gttgcagcagttttgattttcattcttgcagacattatatccatgaaggaatgtaatgttttaagtacctcgatcaacgc
aaattcaagcaccgccatcttgtcagagtgcaacgatcctgtgtttttgtctcatcttctaacgggtgctttagtagcta
ttgtttcattcgtttctgctgatcatatgactaaatttggcgcccttctcggagtgctgatttttcatttgattattatc
aactattcattcagggaccttttcaaagaccaagatgagagctcaaaccgtattccattattacaatgtataggattaaa
ctcatctggtattgcattagttctcttattactcgaaagaaaattagagtttttgaaaagagggcttttcgttatttcct
ccagttcagatggacttgatgatgaattttatagcagacaagcaaaaaacactgaattacagagacacgtttttccaaga
tacatgattgaaaatccagcaaccactctatttgattgcggaagtgtaagaaagacgcatgttccacaagcactggtact
cgtactcaaccttaacagggtagatactacatctcatcattccacggaatcggaaaatatcatctatgacgaatttacag
aaatctttcaaaatattgacatcactcaacaatcacctaggtttaagacgataattaaagtatgcactatggataacaaa
tacgttatcatgacaacaaatttttcaggagagcaggacagttggaaggaagcatctatgtctttcatcgagtttgtatt
agaagtttcaaaaatagtaaaagagaatcacaaagacgtcatctttactggtggtatacacgttggtccccttatttatg
gtttaatgggaaagaacaatccacaattcaacgtatggggtaaagccgtggaaacagccgaggagctggagctaacgtgt
aggactaatcaaatactggtgcttgacgaagtccaaggaatgtttgacgattcgagatttattttccaacagaatccaga
aatagatataatacaagatgaagccagaaatacatacagtcttctcccaaaagaagacaaatcactattaagttga

Protein
Protein IDpfu_aug2.0_50.1_00132.t1
Definition-
>pfu_aug2.0_50.1_00132.t1
MKDQKISPHSSTRNSMETSFVDRQQREEPYTNGASSLDDENQNSRNVSVDETMKKKFQLTKPYLPWRRFESPKQERLYKE
YKQSYIKQVTIVPAVAGFVFSVCSFGLSIHHFTDDRIVPVLVTCVFILIFVAIVSIKIADEVQVDDDHFIAISSVIFLLM
NMSSSVLIQDDVMITSEKNIQWMILLLFLTYVTVPLSFWKCTAIALSTIVVVIATLLVVQDDISNVAGGERPTELAGICI
FSVSGVLIGSFAYFFIDIFLRRTFLDIQNSHAIQAKMKRLKESQDRLLHSLIPQCILDSANIYNGASTEEFYRRTCRYSN
CNASILFARLHGVEPLVRRDAKIFVNFMEEVCENFDKLCKKFSSHPIRYLGCLFKSVCGAPEHNANHAANAIYLGVALVN
FIREIKAKYKMKELDIRVGIHTGEVESGIIGKTQWHFDVLGSAVDVAREIQRMAPAGQVIISHCTRLELRDEFILDTYQK
RASFPFLQIRTFSVRYVIQQFQQFDDMRNIVYRRRRRKGGTSVFFQSFTGSTLGNASRQSNKEESVTKTCFNPSAEVPYR
RLQNQYSHIGILSLIVFGFCGLCVTLLTKDINQQELFLYISGLVFLMVALGTLAMLGRCKIQGSKTTFVVFKAILIAIVL
VAAVLIFILADIISMKECNVLSTSINANSSTAILSECNDPVFLSHLLTGALVAIVSFVSADHMTKFGALLGVLIFHLIII
NYSFRDLFKDQDESSNRIPLLQCIGLNSSGIALVLLLLERKLEFLKRGLFVISSSSDGLDDEFYSRQAKNTELQRHVFPR
YMIENPATTLFDCGSVRKTHVPQALVLVLNLNRVDTTSHHSTESENIIYDEFTEIFQNIDITQQSPRFKTIIKVCTMDNK
YVIMTTNFSGEQDSWKEASMSFIEFVLEVSKIVKENHKDVIFTGGIHVGPLIYGLMGKNNPQFNVWGKAVETAEELELTC
RTNQILVLDEVQGMFDDSRFIFQQNPEIDIIQDEARNTYSLLPKEDKSLLS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495