Gene
| Gene Model ID | pfu_aug2.0_50.1_00133 |
|---|---|
| Locus | scaffold50.1 : 315682 ... 338341 : - |
| To GenomeBrowser | scaffold50.1:315682..338341 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_704.1_65584 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00133.t1 | 2 | 1 | Tetraspannin | 121 | 152 | 3.0e-29 | 101.9 | 0.56 | 2700.0 | -2.7 |
| pfu_aug2.0_50.1_00133.t1 | 2 | 2 | Tetraspannin | 493 | 671 | 3.0e-29 | 101.9 | 6.0e-33 | 3.0e-29 | 101.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00133.t1 | gi|390367437|ref|XP_003731255.1| | 3.0e-28 | |
| pfu_aug2.0_50.1_00133.t1 | gi|676440111|ref|XP_009049069.1| | hypothetical protein LOTGIDRAFT_238638 [Lottia gigantea] | 3.0e-27 |
| pfu_aug2.0_50.1_00133.t1 | gi|585718698|ref|XP_006825930.1| | PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Saccoglossus kowalevskii] | 1.0e-25 |
| pfu_aug2.0_50.1_00133.t1 | gi|390357276|ref|XP_003728970.1| | 9.0e-25 | |
| pfu_aug2.0_50.1_00133.t1 | gi|390354828|ref|XP_003728416.1| | 6.0e-24 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00133.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00133.t1 atgctattcaatttgaagacgtttaacatttttaccacttgctttcggagaaaaatatggttatacgataaaggtaatta cgatgaatttcgacgactactctctctagctgaccttgactctgctattacggatgacggtgacattgacgatgacgtag acgttattaccaaaactatattagattctgcatctttgtgtattcccaataaaatggtcactatcaggagcagcgataag ccatggctacataatggtctacggaaactaattagaaaacgcaaacgtctgtacaaaaaggcaaaaagatcaaatattca atacgattggttgaaatacaagtcaatgcgtaataaatgcaacaaagaaaatcaaaaatccaaagaagcatattatagta aactacaatcgtctttaagtgatggaagtttaaatcctaaacaatggtggaaagttgtaaattcattttttaacaaatcc aaagtcaacgaaatccccacaatcatcaacggagatgatgaatttgttgaaaatatcgacaaagctaatgccttcaacga ttactttgccactcaggcttcggttgacgactctaatgcttttctacctcctccaactgaccctcctcataatttctccc acattgatatatctgaaaatgacgttaaagatattttatctcttcttgatgtttcaaaagcatgcggacctgaccttgtc aatgcaagactacttaaagaagctgcgtctgttctctgtatcccccttgctaaaatctttaacaaatccctttccctgtc tcgattcccagatacatggaaaaaagcaaatgtcacgccagtgcacaaaaaagaaaatcctgctctaataaagaactaca gaccaatatctcttttaagtatcattgttaagaaatggaacattctacctcagaatgtacgtgaagacaattctgtttca aacctgaaattatacctcttcaaagacaacaaacaacatccttacttcaacactgggagggaggggatgaaggggtggga ggaggaaggaaggggcgggatgggggagatgaccatacaaacagacagcatgacgcaggtacccaagaaacacatggatg gaaatgtaaacggatataaaacagaaggcgtacggaatactgtacgtgctctgccggctgtagcgagctcatgcatgtta ttacccgagaaggtcgactgtcattcagagaggacaagtggtcggggaccttacttcgctcaagaggtcaagaatgaggg aggaaatgccgatatttatgaatcatttggcatacaagatgaccttaaactaggcatatcgaccagcatcctcctagagc tggggcactgtgctgatttagcagcttactggccgagatggatccagatcgacatttcactaaggttcaatcgccaacca attaatcagagaactcttgttgtctccatttcaaagctctttggttgcgcatgcgttgccatcggtgtctgggccttatt ggacgaaagcaagttgcttgtatttactgagattggtaaccctggtgaatatgacgtcatctcgctcgtcactacagctg cctatatcttcattgccagcggtgcctttgcagtcattgttggatttttcggatgttgcggagccgtaaaggaaaacaac tgcctgctaatcacttactcggctttggtgctactgacactggtcatgcaagtggctgtagtggtcatctccatcctgtt ccttggaaaggttactgcagagttaaaggcctttttacaagatagaatcaacgaggagtatgacggtaacatcaaaagtg ctcacaggttctcaaaggccatggacttggctcaagtacagtttatgtgctgtggggttaacaattacggcgacttctac aacgccaccaagtggcagaataccaagaaccagagtgacgtcatacctttcacgtgctgtaagcttgacaacaaggaaga tttttataaggacgtcgataaagcccggatgacggatccaaactgcctctcacaacccacgtcagacaactcttacatgg ataaggtcagtgtacatcgatatgtcgttctttccatgtaa |
|
Protein
| Protein ID | pfu_aug2.0_50.1_00133.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00133.t1 MLFNLKTFNIFTTCFRRKIWLYDKGNYDEFRRLLSLADLDSAITDDGDIDDDVDVITKTILDSASLCIPNKMVTIRSSDK PWLHNGLRKLIRKRKRLYKKAKRSNIQYDWLKYKSMRNKCNKENQKSKEAYYSKLQSSLSDGSLNPKQWWKVVNSFFNKS KVNEIPTIINGDDEFVENIDKANAFNDYFATQASVDDSNAFLPPPTDPPHNFSHIDISENDVKDILSLLDVSKACGPDLV NARLLKEAASVLCIPLAKIFNKSLSLSRFPDTWKKANVTPVHKKENPALIKNYRPISLLSIIVKKWNILPQNVREDNSVS NLKLYLFKDNKQHPYFNTGREGMKGWEEEGRGGMGEMTIQTDSMTQVPKKHMDGNVNGYKTEGVRNTVRALPAVASSCML LPEKVDCHSERTSGRGPYFAQEVKNEGGNADIYESFGIQDDLKLGISTSILLELGHCADLAAYWPRWIQIDISLRFNRQP INQRTLVVSISKLFGCACVAIGVWALLDESKLLVFTEIGNPGEYDVISLVTTAAYIFIASGAFAVIVGFFGCCGAVKENN CLLITYSALVLLTLVMQVAVVVISILFLGKVTAELKAFLQDRINEEYDGNIKSAHRFSKAMDLAQVQFMCCGVNNYGDFY NATKWQNTKNQSDVIPFTCCKLDNKEDFYKDVDKARMTDPNCLSQPTSDNSYMDKVSVHRYVVLSM |
|