Gene
| Gene Model ID | pfu_aug2.0_50.1_00134 |
|---|---|
| Locus | scaffold50.1 : 384136 ... 394416 : - |
| To GenomeBrowser | scaffold50.1:384136..394416 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_505.1_29300 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| amine oxidase | GO:0005739 GO:0016020 GO:0016491 GO:0055114 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00134.t2 | 2 | 1 | Amino_oxidase | 5 | 144 | 3.9e-30 | 105.3 | 6.2e-20 | 1.8e-16 | 60.2 |
| pfu_aug2.0_50.1_00134.t2 | 1 | 1 | NAD_binding_8 | 5 | 64 | 2.9e-09 | 36.8 | 2.4e-12 | 7.3e-09 | 35.5 |
| pfu_aug2.0_50.1_00134.t2 | 2 | 2 | Amino_oxidase | 265 | 334 | 3.9e-30 | 105.3 | 6.9e-15 | 2.0e-11 | 43.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00134.t2 | gi|742181603|ref|XP_010888262.1| | PREDICTED: amine oxidase [flavin-containing] B isoform X2 [Esox lucius] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00134.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00134.t1 atggcgacaaagtcaggattgagtgctgctaaacttttgcatgaaaaaggtttgaaagtcattgtactggaagcacgtga ccgagtgggcggaagaacctttacagttcggaatgaagctgtaacgtatgttgatttgggtggtgcttatgttggcccta ctcagaacagaattttacgtctggctgacgagttcgggattaagacattcctcactagagatacggaggactggatattt cattcaaagggacgttctcagaaaataactggtgtctttcctcctttatccggactgcttgccaatcttgacgttaacaa tctactgagaaaaatggacgaaatgggagaagagataccagtcgatgctccctgggatgctcctcatgctgacgagtggg acaagatgacagtaaaagagttttacaagaaaactatatggacaaaagatgcatggaagataggagaccagttcattaac gtgaatgtaacgtctgagagtcacgaggcgtctttactatggtttctatggtacgtacgtcagtgtggaggatccaatag aattatgtcaacagataacggagggcaatgcgtacattacgaggaacagaactggttagcagagcagtggtctggtgggt gctataccgttatgatgcctcctggattcctaactacattcggtagagaaataagaaaacctgtaggtagaatacatttt tccggaacggagacagctacagaatggtcgggatacatggagggagcggtacaagctggagagcgcgcagcaaaggagat tctctttgacagaggagaaattgaccaatcagaaatactgaaagacgaacccgaaaacgagttcgttaagcctatgccat ttccaacaacctttttcgagaggaatgctccttcagtgggaggacttttgaaattcctcggctgtgtatcgacattagct gtagcttgttcaggggcaattttctatcgacggttcaagacatag |
|
| Transcript ID | pfu_aug2.0_50.1_00134.t2 |
| Definition | - |
>pfu_aug2.0_50.1_00134.t2 atggcgacaaagtcaggattgagtgctgctaaacttttgcatgaaaaaggtttgaaagtcattgtactggaagcacgtga ccgagtgggcggaagaacctttacagttcggaatgaagctgtaacgtatgttgatttgggtggtgcttatgttggcccta ctcagaacagaattttacgtctggctgacgagttcgggattaagacattcctcactagagatacggaggactggatattt cattcaaagggacgttctcagaaaataactggtgtctttcctcctttatccggactgcttgccaatcttgacgttaacaa tctactgagaaaaatggacgaaatgggagaagagataccagtcgatgctccctgggatgctcctcatgctgacgagtggg acaagatgacagtaaaagagttttacaagaaaactatatggacaaaagatgcatggaagataggagaccagttcattaac gtgaatgtaacgtctgagagtcacgaggcgtctttactatggtttctatggtacgtacgtcagtgtggaggatccaatag aattatgtcaacagataacggagggcaacagagtaggacgcttcattttcctttgaggaaactaattattcgtgtatttt ctagagatgcatggaagataggagaccagttcattaacgtgaatgtaacgtctgagagtcacgaggcgtctttactatgg tttctatggtacgtacgtcagtgtggaggatccaatagaattatgtcaacagataacggagggcaatgcgtacattacga ggaacagaactggttagcagagcagtggtctggtgggtgctataccgttatgatgcctcctggattcctaactacattcg gtagagaaataagaaaacctgtaggtagaatacatttttccggaacggagacagctacagaatggtcgggatacatggag ggagcggtacaagctggagagcgcgcagcaaaggagattctctttgacagaggagaaattgaccaatcagaaatactgaa agacgaacccgaaaacgagttcgttaagcctatgccatttccaacaacctttttcgagaggaatgctccttcagtgggag gacttttgaaattcctcggctgtgtatcgacattagctgtagcttgttcaggggcaattttctatcgacggttcaagaca tag |
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Protein
| Protein ID | pfu_aug2.0_50.1_00134.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00134.t1 MATKSGLSAAKLLHEKGLKVIVLEARDRVGGRTFTVRNEAVTYVDLGGAYVGPTQNRILRLADEFGIKTFLTRDTEDWIF HSKGRSQKITGVFPPLSGLLANLDVNNLLRKMDEMGEEIPVDAPWDAPHADEWDKMTVKEFYKKTIWTKDAWKIGDQFIN VNVTSESHEASLLWFLWYVRQCGGSNRIMSTDNGGQCVHYEEQNWLAEQWSGGCYTVMMPPGFLTTFGREIRKPVGRIHF SGTETATEWSGYMEGAVQAGERAAKEILFDRGEIDQSEILKDEPENEFVKPMPFPTTFFERNAPSVGGLLKFLGCVSTLA VACSGAIFYRRFKT |
|
| Protein ID | pfu_aug2.0_50.1_00134.t2 |
| Definition | - |
>pfu_aug2.0_50.1_00134.t2 MATKSGLSAAKLLHEKGLKVIVLEARDRVGGRTFTVRNEAVTYVDLGGAYVGPTQNRILRLADEFGIKTFLTRDTEDWIF HSKGRSQKITGVFPPLSGLLANLDVNNLLRKMDEMGEEIPVDAPWDAPHADEWDKMTVKEFYKKTIWTKDAWKIGDQFIN VNVTSESHEASLLWFLWYVRQCGGSNRIMSTDNGGQQSRTLHFPLRKLIIRVFSRDAWKIGDQFINVNVTSESHEASLLW FLWYVRQCGGSNRIMSTDNGGQCVHYEEQNWLAEQWSGGCYTVMMPPGFLTTFGREIRKPVGRIHFSGTETATEWSGYME GAVQAGERAAKEILFDRGEIDQSEILKDEPENEFVKPMPFPTTFFERNAPSVGGLLKFLGCVSTLAVACSGAIFYRRFKT |
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