Gene
| Gene Model ID | pfu_aug2.0_50.1_00135 |
|---|---|
| Locus | scaffold50.1 : 404734 ... 410216 : - |
| To GenomeBrowser | scaffold50.1:404734..410216 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_5925.1_59893 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00135.t1 | 1 | 1 | Lectin_C | 82 | 188 | 9.9e-09 | 35.7 | 2.3e-12 | 1.7e-08 | 35.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00135.t1 | gi|291236141|ref|XP_002737988.1| | PREDICTED: C-type mannose receptor 2-like [Saccoglossus kowalevskii] | 2.0e-10 |
| pfu_aug2.0_50.1_00135.t1 | gi|585712607|ref|XP_006824947.1| | PREDICTED: zonadhesin-like [Saccoglossus kowalevskii] | 7.0e-09 |
| pfu_aug2.0_50.1_00135.t1 | gi|585702202|ref|XP_006823027.1| | PREDICTED: zonadhesin-like isoform X3 [Saccoglossus kowalevskii] | 6.0e-08 |
| pfu_aug2.0_50.1_00135.t1 | gi|585702194|ref|XP_006823025.1| | PREDICTED: zonadhesin-like isoform X1 [Saccoglossus kowalevskii] | 2.0e-07 |
| pfu_aug2.0_50.1_00135.t1 | gi|585707043|ref|XP_006823914.1| | PREDICTED: zonadhesin-like [Saccoglossus kowalevskii] | 5.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00135.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00135.t1 atgggagacacattaccagatggaaagcaagagaacaataatttgcgatatgaatttgacatatcatcgttaaactccac aacatatacatcgtccagtggcaggagatacagcttcacattcagtccatttggctggaagacttggtaccaagcaagag tatttgacatatcgtcgtttaactccacaacatatacatcgtccagtggcaggagatacagcttcacattcagtccattt ggctggaagacttggtaccaagcaagagatatttgtgaggcttacggtggaaagttggcagaaccgaccacaaagtccga gcttatatctattgccagtaaaattccgttctactttgtagggggaatatggattggcggcactgacgaagggagtgatg gtacatataaatgggcaagttccggtaatgtaataccctatgacaactggcctttcctttacataaaacttggacctttg tttaattgtatcactataacagccgtttttggaatctggggtgaggccatctgcgccgctccctcacccttccttctctg tgaatatccttag |
|
Protein
| Protein ID | pfu_aug2.0_50.1_00135.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00135.t1 MGDTLPDGKQENNNLRYEFDISSLNSTTYTSSSGRRYSFTFSPFGWKTWYQARVFDISSFNSTTYTSSSGRRYSFTFSPF GWKTWYQARDICEAYGGKLAEPTTKSELISIASKIPFYFVGGIWIGGTDEGSDGTYKWASSGNVIPYDNWPFLYIKLGPL FNCITITAVFGIWGEAICAAPSPFLLCEYP |
|