Gene
| Gene Model ID | pfu_aug2.0_50.1_00137 |
|---|---|
| Locus | scaffold50.1 : 474360 ... 477116 : - |
| To GenomeBrowser | scaffold50.1:474360..477116 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_3659.1_01494 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00137.t1 | 1 | 1 | Tetraspannin | 38 | 197 | 1.2e-17 | 63.9 | 3.9e-21 | 1.4e-17 | 63.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00137.t1 | gi|751238828|ref|XP_011173380.1| | PREDICTED: tetraspanin-1 isoform X2 [Solenopsis invicta] | 1.0e-12 |
| pfu_aug2.0_50.1_00137.t1 | gi|751238825|ref|XP_011173379.1| | PREDICTED: tetraspanin-1 isoform X1 [Solenopsis invicta] | 3.0e-12 |
| pfu_aug2.0_50.1_00137.t1 | gi|58385944|ref|XP_314330.2| | AGAP004861-PA [Anopheles gambiae str. PEST] | 3.0e-12 |
| pfu_aug2.0_50.1_00137.t1 | gi|242013837|ref|XP_002427607.1| | tetraspanin-18, putative [Pediculus humanus corporis] | 4.0e-12 |
| pfu_aug2.0_50.1_00137.t1 | gi|751238832|ref|XP_011173382.1| | PREDICTED: tetraspanin-1 isoform X3 [Solenopsis invicta] | 4.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00137.t1 atgctgctcctaccaggcgtaataatgttagcaaatgtagaatacatcaatgaaaaagtagttcctttacttcggaacct ctcggttggtggtttcaatttggcagatctcgcagatgatctcgcgatagtaatggtagtgtccggtgggattgttctat ttatagccatactgggaatgtgcggagcgtgccgaaacaaacggatatgcctttgcttgtacggaataattgtacttacc ttgctggtcggaaagataacagccgttgtactgtggattgtgttgaatacagaggtgcaaaaatacataaaagatcagat gtattcacagttattgaactcctacacgtacagtgatgtctcatcagaccaggtgtccacggcatggaattatatgttta tagcactggaatgttgtgctataaacaagattacaggtaccacaaacgattttgacaccacaccatggatatcacaagga aacaatggcggccacgaaatcccgattttctgctgttctggaatcgatgaaaattctgcttccgctacatttacagcatg cactacgacagtgacttccggttattatacactaaggtacttggcgtcatcgtttcgtgttatagtgtgtaaaaacatga ataaaacagaaacagtgtga |
|
Protein
| Protein ID | pfu_aug2.0_50.1_00137.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00137.t1 MLLLPGVIMLANVEYINEKVVPLLRNLSVGGFNLADLADDLAIVMVVSGGIVLFIAILGMCGACRNKRICLCLYGIIVLT LLVGKITAVVLWIVLNTEVQKYIKDQMYSQLLNSYTYSDVSSDQVSTAWNYMFIALECCAINKITGTTNDFDTTPWISQG NNGGHEIPIFCCSGIDENSASATFTACTTTVTSGYYTLRYLASSFRVIVCKNMNKTETV |
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