Gene
| Gene Model ID | pfu_aug2.0_50.1_00142 |
|---|---|
| Locus | scaffold50.1 : 555702 ... 582857 : + |
| To GenomeBrowser | scaffold50.1:555702..582857 |
| Genes list of scaffold | scaffold50.1 |
| Synonym | pfu_aug1.0_303.1_36475 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein af-10-like | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_50.1_00142.t1 | 1 | 1 | zf-HC5HC2H_2 | 9 | 110 | 3.8e-22 | 78.3 | 1.1e-25 | 8.1e-22 | 77.3 |
| pfu_aug2.0_50.1_00142.t1 | 1 | 1 | zf-HC5HC2H | 15 | 110 | 3.5e-20 | 71.9 | 1.0e-23 | 7.5e-20 | 70.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_50.1_00142.t1 | gi|676434890|ref|XP_009047379.1| | hypothetical protein LOTGIDRAFT_138903 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_50.1_00142.t1 | gi|751236238|ref|XP_011171945.1| | PREDICTED: protein AF-10-like [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_50.1_00142.t1 | gi|759043188|ref|XP_011330466.1| | PREDICTED: protein AF-10-like [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_50.1_00142.t1 | gi|752864142|ref|XP_011268462.1| | PREDICTED: protein AF-10 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_50.1_00142.t1 | gi|665803171|ref|XP_008549669.1| | PREDICTED: protein AF-10-like [Microplitis demolitor] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_50.1_00142.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00142.t1 atgcgaatcacaagagagagctgcacgagtgcttcttggtgtcatgtagtatgtgctttgtttataccggaggcttggtt tgctaatgttcagactatggaacctatagtactgaaaaacttacctcctgaaaggtttgcaaagacttgctatatatgtg aagaacaaggcagagccagcaaggctaacacaggagcatgtatgacgtgtaataggaatggatgtaaacagagtttccat gtcacatgtgcccagggccagggtttgttgtgtgaagagaagggtaactatggcgacaacgttaaatattgtgggtactg cacttaccactacaagaaattggtaagggtcagaaaataccccgcaagccgtacaaaaaaggacaaccatataaagcaaa taccagcttttaagccaattccaacagaaaattccacccctgaatccacccctgaaaaaacgtcaacttcaaatgatggg aagattgtcaagaagaccatgaagccagaagtaaaggagaatgggagatcattattaccggctttccaatcctcagcatc aacaattcaagttactagtgctagtatagataccgaaaaacctaaggatcttacccctataacgcccccttcctcaaaca ccagcagtgggctcgaacctcttttacaaaagtttgtgaaaggaaaacattttcatagtacgtctttgaatgctcataga tctcaagaaaaaggagaaaagaagaccaaacgttcaaaaccatcattactggcagtaaatcggagacttagtcggaatct gtccatagacggagaagatgctgtgcatcctgttgctaggaaacaaaagaagaagggggagttaactctgaacacaaaca gcattggaagtgttacaggcaatggtttagggagcagtgtttttggtggcagtccatattttcagagtttgagtgcaccc ggccctctgtccctgtcgagctttggacaaaatgcctcaccaggtttaactccaggatccctaacagacagttgttcatc acagagctttttatgtggacctccaaaaatgttccccagccagcaaacagtggaaaaggaagcagctaatggtgagtttc ccacaaccctggagcagctattagagagacagtgggaacaaggatcacagttcttgatgaaacaaggggaacattttgac attgcatcattactacattgcctacatcatctaaagtcagaaaacaaacagctggaggaccatgtcaaatcattgtcggc tagaaaggatcatttactagcagttaacgctcgactttccattcctctcgactcgggtatcaatcaccttagctccagtt tctctccggaaaagtccaaggaactctctgctgtcaatcttcaggttagccaaaattcatcaacattaagtactacagca agaaccagtatatcctcatctactatcaaccctatgtctattggagcccagccaacagtgagtacagtgacattaggtag ctcctctctgacctcctccctgatctcattagccaatgcagcaacctctgtctccaattcttcatttacctcatctgtgc ttccctttacgtcatccagtgctacagttaacggcccatcaaccaaccctggtgtagatactcacaacaaacatagcagc aagactcattcccagtctggaaatgtctga |
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Protein
| Protein ID | pfu_aug2.0_50.1_00142.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_50.1_00142.t1 MRITRESCTSASWCHVVCALFIPEAWFANVQTMEPIVLKNLPPERFAKTCYICEEQGRASKANTGACMTCNRNGCKQSFH VTCAQGQGLLCEEKGNYGDNVKYCGYCTYHYKKLVRVRKYPASRTKKDNHIKQIPAFKPIPTENSTPESTPEKTSTSNDG KIVKKTMKPEVKENGRSLLPAFQSSASTIQVTSASIDTEKPKDLTPITPPSSNTSSGLEPLLQKFVKGKHFHSTSLNAHR SQEKGEKKTKRSKPSLLAVNRRLSRNLSIDGEDAVHPVARKQKKKGELTLNTNSIGSVTGNGLGSSVFGGSPYFQSLSAP GPLSLSSFGQNASPGLTPGSLTDSCSSQSFLCGPPKMFPSQQTVEKEAANGEFPTTLEQLLERQWEQGSQFLMKQGEHFD IASLLHCLHHLKSENKQLEDHVKSLSARKDHLLAVNARLSIPLDSGINHLSSSFSPEKSKELSAVNLQVSQNSSTLSTTA RTSISSSTINPMSIGAQPTVSTVTLGSSSLTSSLISLANAATSVSNSSFTSSVLPFTSSSATVNGPSTNPGVDTHNKHSS KTHSQSGNV |
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