Gene
| Gene Model ID | pfu_aug2.0_5005.1_19379 |
|---|---|
| Locus | scaffold5005.1 : 29457 ... 31255 : - |
| To GenomeBrowser | scaffold5005.1:29457..31255 |
| Genes list of scaffold | scaffold5005.1 |
| Synonym | pfu_aug1.0_2406.1_58897 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| probable g-protein coupled receptor 83 | GO:0004930 GO:0007186 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_5005.1_19379.t1 | 1 | 1 | 7tm_1 | 2 | 111 | 6.8e-19 | 68.0 | 1.1e-22 | 8.3e-19 | 67.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_5005.1_19379.t1 | gi|676445783|ref|XP_009050865.1| | hypothetical protein LOTGIDRAFT_65232, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_5005.1_19379.t1 | gi|524894388|ref|XP_005103692.1| | PREDICTED: probable G-protein coupled receptor 83-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_5005.1_19379.t1 | gi|676495874|ref|XP_009067028.1| | hypothetical protein LOTGIDRAFT_55047, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_5005.1_19379.t1 | gi|632937596|ref|XP_007900281.1| | PREDICTED: probable G-protein coupled receptor 83 [Callorhinchus milii] | 1.0e-28 |
| pfu_aug2.0_5005.1_19379.t1 | gi|556960947|ref|XP_005990884.1| | PREDICTED: probable G-protein coupled receptor 83-like [Latimeria chalumnae] | 4.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_5005.1_19379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5005.1_19379.t1 atgacagttgcgacattccttgtccaatatgtgctccctctagtcaccattaccgtaacgtacagtcgtatcgtacacag gctatgggtcaggacacaccttggcgtagttactgagacacaactagtcttacagattcaaaacaaaaggaagagtatca aattgctggtggcggtagtggttgttttcgctgtttgttggatgcccctcaatctatatcatcttctgacagacttgtac cctgatcctaccgtttttccctacgatacaaatgcattctttgtttgccagtggatcgctataagtagtgcttgtatcaa cccgatcttgtattgctacatcaacccgtcttttcgagcggaagtaaaatctaggttttcttgctgttcctctagatctg aaacacctcatgtatcggagatggaaatggatgacttgttaactagagagacattgtcaaggaaccggcggtacacactc aattcatcatctacagatgccaggcgtttggagaataatcatgttaaggactacgcatataaatttgttagttcacagca aaatgggcacattcatgtgtga |
|
Protein
| Protein ID | pfu_aug2.0_5005.1_19379.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_5005.1_19379.t1 MTVATFLVQYVLPLVTITVTYSRIVHRLWVRTHLGVVTETQLVLQIQNKRKSIKLLVAVVVVFAVCWMPLNLYHLLTDLY PDPTVFPYDTNAFFVCQWIAISSACINPILYCYINPSFRAEVKSRFSCCSSRSETPHVSEMEMDDLLTRETLSRNRRYTL NSSSTDARRLENNHVKDYAYKFVSSQQNGHIHV |
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