Gene
| Gene Model ID | pfu_aug2.0_501.1_04254 |
|---|---|
| Locus | scaffold501.1 : 54796 ... 78902 : + |
| To GenomeBrowser | scaffold501.1:54796..78902 |
| Genes list of scaffold | scaffold501.1 |
| Synonym | pfu_aug1.0_5330.1_01953 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_501.1_04254.t1 | 7 | 1 | WD40 | 145 | 180 | 2.9e-28 | 96.7 | 0.00051 | 0.94 | 9.4 |
| pfu_aug2.0_501.1_04254.t1 | 7 | 2 | WD40 | 201 | 224 | 2.9e-28 | 96.7 | 0.0031 | 5.7 | 6.9 |
| pfu_aug2.0_501.1_04254.t1 | 7 | 3 | WD40 | 245 | 273 | 2.9e-28 | 96.7 | 0.002 | 3.8 | 7.5 |
| pfu_aug2.0_501.1_04254.t1 | 7 | 4 | WD40 | 283 | 316 | 2.9e-28 | 96.7 | 4.7e-11 | 8.7e-08 | 31.7 |
| pfu_aug2.0_501.1_04254.t1 | 7 | 5 | WD40 | 326 | 363 | 2.9e-28 | 96.7 | 8.7e-08 | 0.00016 | 21.4 |
| pfu_aug2.0_501.1_04254.t1 | 7 | 6 | WD40 | 423 | 449 | 2.9e-28 | 96.7 | 0.016 | 30.0 | 4.6 |
| pfu_aug2.0_501.1_04254.t1 | 7 | 7 | WD40 | 454 | 491 | 2.9e-28 | 96.7 | 1.5e-09 | 2.7e-06 | 27.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_501.1_04254.t1 | gi|524885717|ref|XP_005099463.1| | PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_501.1_04254.t1 | gi|524885715|ref|XP_005099462.1| | PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_501.1_04254.t1 | gi|390341295|ref|XP_782058.3| | PREDICTED: DDB1- and CUL4-associated factor 11 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_501.1_04254.t1 | gi|524885719|ref|XP_005099464.1| | PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_501.1_04254.t1 | gi|301771382|ref|XP_002921126.1| | PREDICTED: DDB1- and CUL4-associated factor 11 isoform X1 [Ailuropoda melanoleuca] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_501.1_04254.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_501.1_04254.t1 atgaacgcgtctagtgacgttagagaatcaagctcaagtcgagagagaacaagcagcgatagtgagactcctgatctaca agcagttctggcgtacttaatcagaagtggacaggttcggattttacagcaggaggatgatctctacgatgatgaggaag ataaagaggaagatacggattgtgatgaccgagagttcgtcggcgtcacctctacccctcgtgtggaccccaatccagat atcagcagactagagagtaatgacttgaagcaggagattttagagaggtcgggaaggacggtcaaacggaggcgaacaca tcaacctacagtattacatatgctacaaaacagagaggttggcatgcggcaaccagagaatttctccacaggggacagac ggattataagttgtcagtacctacccaatcataaaactacggtggccaatatacgacataaagtgttctgtggtacatac tccaaatctggtgatgtcttcctttccgcttctcaagaccagtttctgagaatctacgacacatcgtacggtcagttcaa agaattcaaggcaataagggccagagatgtgggctggagcgtcctagacacagcctttagtcctgatgggaactatatta tatactccagctggtctgattgtattcatctatgcaacatttacggggattatgagaaacatgatgccctaccattgaat ccaggagatcgaagctttgccatattttctttgactttctcctcagacaacaaagaaattcttggcggggccaatgatgg ttgtttgtatgtatacgacagagaaagtaacaacaggatattaaggatagactcccacgatgacgatgtgaatgccgtag cgttcgctgacgattcctcacatatcctctttagtggtggtgacgatggattagttagggtatgggacaggagaacgttg agagaggacgaccctgaaccttgtggtgtaatggccgggcatactgatggtattacctatattgattccaagggtgatgc ccgatatcttatcactaattccaaagatcagacgatgaaactctgggatatgagaaaattctcctcttcagatgccattg aggcaacaaagaaagctgtatccaggcaacgatgggactacaggtggcagtctgtaccgaaatcagtgacaagaaggaaa tctatagaaggggatacctctataatgacatatcgtggacattctgtattacacacgctgatccgttgtcacttctcgcc ggaatctactaccggacaaagatacgtctactctggttgtgcaagtggtgcattagttatttacgacatactgacgggga agatggtgtccaagctcactggtcataaatcgtgtaccagggacgtgtcatggcatccatatcagaataccatagtctgc acttcttgggatggtacaatatcaaaatgggactatgttcacgaagatccagaagaatcggacgaatcttcatccagtga tgatgaagatgacagtgaagattacatggtggcaagaagacgcagtaaacgacatgcgcggcaggaaaaaatcttcaaac ggaacatggccaaatttggtgccttcttcagttacatttcattatcattttgcatctgttga |
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Protein
| Protein ID | pfu_aug2.0_501.1_04254.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_501.1_04254.t1 MNASSDVRESSSSRERTSSDSETPDLQAVLAYLIRSGQVRILQQEDDLYDDEEDKEEDTDCDDREFVGVTSTPRVDPNPD ISRLESNDLKQEILERSGRTVKRRRTHQPTVLHMLQNREVGMRQPENFSTGDRRIISCQYLPNHKTTVANIRHKVFCGTY SKSGDVFLSASQDQFLRIYDTSYGQFKEFKAIRARDVGWSVLDTAFSPDGNYIIYSSWSDCIHLCNIYGDYEKHDALPLN PGDRSFAIFSLTFSSDNKEILGGANDGCLYVYDRESNNRILRIDSHDDDVNAVAFADDSSHILFSGGDDGLVRVWDRRTL REDDPEPCGVMAGHTDGITYIDSKGDARYLITNSKDQTMKLWDMRKFSSSDAIEATKKAVSRQRWDYRWQSVPKSVTRRK SIEGDTSIMTYRGHSVLHTLIRCHFSPESTTGQRYVYSGCASGALVIYDILTGKMVSKLTGHKSCTRDVSWHPYQNTIVC TSWDGTISKWDYVHEDPEESDESSSSDDEDDSEDYMVARRRSKRHARQEKIFKRNMAKFGAFFSYISLSFCIC |
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