Gene
| Gene Model ID | pfu_aug2.0_502.1_07595 |
|---|---|
| Locus | scaffold502.1 : 1 ... 19728 : + |
| To GenomeBrowser | scaffold502.1:1..19728 |
| Genes list of scaffold | scaffold502.1 |
| Synonym | pfu_aug1.0_32690.1_19463 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 44 | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_502.1_07595.t1 | 4 | 1 | zf-UBP | 1 | 51 | 4.7e-16 | 58.6 | 1.3e-19 | 4.7e-16 | 58.6 |
| pfu_aug2.0_502.1_07595.t1 | 2 | 1 | UCH | 167 | 590 | 0.0 | 172.6 | 0.0 | 0.0 | 168.6 |
| pfu_aug2.0_502.1_07595.t1 | 2 | 1 | UCH_1 | 169 | 205 | 2.2e-16 | 60.1 | 4.9e-08 | 0.00018 | 21.0 |
| pfu_aug2.0_502.1_07595.t1 | 2 | 2 | UCH_1 | 368 | 571 | 2.2e-16 | 60.1 | 6.0e-13 | 2.2e-09 | 37.1 |
| pfu_aug2.0_502.1_07595.t1 | 4 | 2 | zf-UBP | 396 | 402 | 4.7e-16 | 58.6 | 1.3 | 4600.0 | -2.2 |
| pfu_aug2.0_502.1_07595.t1 | 4 | 3 | zf-UBP | 456 | 460 | 4.7e-16 | 58.6 | 2.0 | 7500.0 | -2.9 |
| pfu_aug2.0_502.1_07595.t1 | 4 | 4 | zf-UBP | 555 | 568 | 4.7e-16 | 58.6 | 4.0 | 15000.0 | -4.7 |
| pfu_aug2.0_502.1_07595.t1 | 2 | 2 | UCH | 611 | 631 | 0.0 | 172.6 | 1.5 | 5600.0 | -3.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_502.1_07595.t1 | gi|676481527|ref|XP_009062405.1| | hypothetical protein LOTGIDRAFT_166748 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_502.1_07595.t1 | gi|524898513|ref|XP_005105704.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-B-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_502.1_07595.t1 | gi|291228611|ref|XP_002734273.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_502.1_07595.t1 | gi|260800015|ref|XP_002594932.1| | hypothetical protein BRAFLDRAFT_277684 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_502.1_07595.t1 | gi|573891226|ref|XP_006633371.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-A-like isoform X2 [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_502.1_07595.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_502.1_07595.t1 gcttgtttaagctgccctaatgtagcatgtggaagatacaatgaagaacatgccctaaaacacttcaaagaaagacagca ccccctttgcattgaagtaaatgagaagtatgtttattgttatgaatgtgacgattacgtgttgaatgacaatgcagcag gtgatctaaagattcttcgcagcgctctcagtgccatagcaacacaatccttctctgatgtggaatcaaggggaagacga ctcctgcgttcttactctcatactaccgtcacatcaccgcagaaaagtgatgaagatgataagctggccacagctgaatt ccatagaaggacatgtattctgaggaaagtgtttactgcatggaaattatgtgctcatctacacaaaggaggtcaggtaa tgaatacaccaaagaaggagaaatcagaggctttatctgacagtccctctctgtctcctagcaactctttcctgaaacgc cgtacaattataccaggggtcacagggttacgtaacctaggcaacacatgctatatgaactcggttttacaagttctcag ccatttggaacccttcagagaattcttcatgaagagaacagattcttgttctgacagagttatgacccctgaaagtagtc cacaaagctcttctctatactacactccaaaatcatcactgaagccacacaaatccttccagtcaccaattatttctccc ggtatgtctccggtttcacatagattgcctgaaattccatcatgcatcagtgactctcaaacttctacaccgcgttccac tcgatatctgagtcgtcagtcaacaatggagtgctttcagcacctgatgacaccagtgtcgtctaagaagtctcttacat acggaggacttaatgggggatctacggcaaagtcactgttaaagaaaagactgatctgctcagtggaggaaagggaaaca actcacagttatgaatctttatgtgaggaggtgaatggtttattccgtgtgttgtggtcagggcgctgggcccaggttag ccctcatgccttcctcagggccgtctggcagaaaatccccacatttaaaggtcacgcccaacatgacgcacaggaattct tatgttttaacaaatgtaataccttatctctgaaaatgagtgtctctaaatcaaagcaggtgaaatgccttgagtgtaac aatatctcggagagaacagagccgttcatggacctatctttagaattcccagaacggtatcagattaccatagataaccc cagagctgctcaggacatctgccatgttacagaaatgctgcacactttcacagaaatagaaaagcttgatggcaaaattt acaagtgtgaaaaatgcaatggtatttggtcacaaagtaagtcaccaaaagtgccagtttactcctatgctcagaaacag tttcttcttggtgatatgccacctgtacttcgattacatttaaaaagattcagatggagtgggagacttcatcgagagaa aatatccacacaggttggcattgatgagacattggacatgactccattctgtgtgaatcctgaccccgggggcagtgtat accacttgatgggagttatagtacatcatgggaggggatttgggtgtggtcattatacagcatactgctggaactcagaa gctgaatcatgggtgcactgtaatgattctaggatgaagttttgtactttggacgaagttttacaatgtcagtgttatat tctggtgtataaacgatctcaagggcagacaactccaacatcggacagtcctgactgtgatatgaaattaagctttaaca gatctcagggaagtttctcgcaaaaaattgatgaggatattacatttaatttcaaaactcccccaacgatcgcagcaaca aataggaaaaaaagacttagtgaccatttgagtgagacagacagaattatcaaacgacgaaggtctactctctggtga |
|
Protein
| Protein ID | pfu_aug2.0_502.1_07595.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_502.1_07595.t1 ACLSCPNVACGRYNEEHALKHFKERQHPLCIEVNEKYVYCYECDDYVLNDNAAGDLKILRSALSAIATQSFSDVESRGRR LLRSYSHTTVTSPQKSDEDDKLATAEFHRRTCILRKVFTAWKLCAHLHKGGQVMNTPKKEKSEALSDSPSLSPSNSFLKR RTIIPGVTGLRNLGNTCYMNSVLQVLSHLEPFREFFMKRTDSCSDRVMTPESSPQSSSLYYTPKSSLKPHKSFQSPIISP GMSPVSHRLPEIPSCISDSQTSTPRSTRYLSRQSTMECFQHLMTPVSSKKSLTYGGLNGGSTAKSLLKKRLICSVEERET THSYESLCEEVNGLFRVLWSGRWAQVSPHAFLRAVWQKIPTFKGHAQHDAQEFLCFNKCNTLSLKMSVSKSKQVKCLECN NISERTEPFMDLSLEFPERYQITIDNPRAAQDICHVTEMLHTFTEIEKLDGKIYKCEKCNGIWSQSKSPKVPVYSYAQKQ FLLGDMPPVLRLHLKRFRWSGRLHREKISTQVGIDETLDMTPFCVNPDPGGSVYHLMGVIVHHGRGFGCGHYTAYCWNSE AESWVHCNDSRMKFCTLDEVLQCQCYILVYKRSQGQTTPTSDSPDCDMKLSFNRSQGSFSQKIDEDITFNFKTPPTIAAT NRKKRLSDHLSETDRIIKRRRSTLW |
|