Gene
| Gene Model ID | pfu_aug2.0_502.1_07603 |
|---|---|
| Locus | scaffold502.1 : 146475 ... 147355 : - |
| To GenomeBrowser | scaffold502.1:146475..147355 |
| Genes list of scaffold | scaffold502.1 |
| Synonym | pfu_aug1.0_4998.1_67124 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_502.1_07603.t1 | 1 | 1 | MMR_HSR1 | 21 | 128 | 1.1e-07 | 31.7 | 7.7e-11 | 1.9e-07 | 31.0 |
| pfu_aug2.0_502.1_07603.t1 | 1 | 1 | Ras | 22 | 179 | 4.1e-29 | 101.0 | 2.1e-32 | 5.2e-29 | 100.7 |
| pfu_aug2.0_502.1_07603.t1 | 1 | 1 | Miro | 22 | 134 | 7.7e-14 | 52.2 | 4.7e-17 | 1.2e-13 | 51.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_502.1_07603.t1 | gi|676490214|ref|XP_009065196.1| | hypothetical protein LOTGIDRAFT_177571 [Lottia gigantea] | 2.0e-26 |
| pfu_aug2.0_502.1_07603.t1 | gi|558161724|ref|XP_006123011.1| | PREDICTED: GTP-binding protein Rhes-like [Pelodiscus sinensis] | 2.0e-24 |
| pfu_aug2.0_502.1_07603.t1 | gi|556968604|ref|XP_005993251.1| | PREDICTED: GTP-binding protein Rhes-like [Latimeria chalumnae] | 2.0e-24 |
| pfu_aug2.0_502.1_07603.t1 | gi|657593768|ref|XP_008301470.1| | PREDICTED: GTP-binding protein Rhes-like [Stegastes partitus] | 2.0e-24 |
| pfu_aug2.0_502.1_07603.t1 | gi|432843028|ref|XP_004065548.1| | PREDICTED: GTP-binding protein Rhes-like [Oryzias latipes] | 1.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_502.1_07603.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_502.1_07603.t1 atggcgggtagaaaattaccagatttggcaacattgagaccaaccaaagatgtcacagttcaaatagcagttctgggttc gacaaagagtggaaagacagctatgattaaccagtatgtccacaacagatttgtcagtaagtacagtgaaactatagagg atcttcacaagaaggaaaggaaactagaagacctatacgtgatgcaagatattgtggacacatctgggtgtattctgtat gacgtatttagaaagaaagtcatcaagaggtcggatgtatttatattgactttctccttgatcgataagaaatcatttcg tgaaatgaaaaacattcgtcagcaggtgatgactatacatggcagaaatgcgccgattctggtcgtaggtacccatagtg atcatatgaacgggagaatactcaggtacaagacggcaaagacatttgttgagaaatgctggaatcatgtgtacatagaa tgttcctccaggttccatgacgacgcagagagagtgtttgataaggctgttaggctgttaccactaggaacaacattccg atcaagactgcgatcaagggatggaaacatatatgttatgtcaaaaacagtggataaaagaaggggacttatcggtatac agtggaagaaagtatactag |
|
Protein
| Protein ID | pfu_aug2.0_502.1_07603.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_502.1_07603.t1 MAGRKLPDLATLRPTKDVTVQIAVLGSTKSGKTAMINQYVHNRFVSKYSETIEDLHKKERKLEDLYVMQDIVDTSGCILY DVFRKKVIKRSDVFILTFSLIDKKSFREMKNIRQQVMTIHGRNAPILVVGTHSDHMNGRILRYKTAKTFVEKCWNHVYIE CSSRFHDDAERVFDKAVRLLPLGTTFRSRLRSRDGNIYVMSKTVDKRRGLIGIQWKKVY |
|