Gene
| Gene Model ID | pfu_aug2.0_502.1_07605 |
|---|---|
| Locus | scaffold502.1 : 176086 ... 198112 : - |
| To GenomeBrowser | scaffold502.1:176086..198112 |
| Genes list of scaffold | scaffold502.1 |
| Synonym | pfu_aug1.0_4998.1_67128 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| paxillin isoform x3 | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_502.1_07605.t1 | 4 | 1 | LIM | 335 | 379 | 0.0 | 194.3 | 1.2e-16 | 5.9e-13 | 48.6 |
| pfu_aug2.0_502.1_07605.t1 | 4 | 2 | LIM | 385 | 440 | 0.0 | 194.3 | 3.1e-18 | 1.5e-14 | 53.7 |
| pfu_aug2.0_502.1_07605.t1 | 4 | 3 | LIM | 444 | 496 | 0.0 | 194.3 | 8.9e-20 | 4.4e-16 | 58.6 |
| pfu_aug2.0_502.1_07605.t1 | 4 | 4 | LIM | 503 | 558 | 0.0 | 194.3 | 1.1e-16 | 5.5e-13 | 48.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_502.1_07605.t1 | gi|657782011|ref|XP_008318614.1| | PREDICTED: paxillin isoform X3 [Cynoglossus semilaevis] | 0.0 |
| pfu_aug2.0_502.1_07605.t1 | gi|657578259|ref|XP_008292995.1| | PREDICTED: paxillin-like isoform X2 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_502.1_07605.t1 | gi|676449207|ref|XP_009051981.1| | hypothetical protein LOTGIDRAFT_187724 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_502.1_07605.t1 | gi|554815742|ref|XP_005918674.1| | PREDICTED: paxillin-like isoform X3 [Haplochromis burtoni] | 0.0 |
| pfu_aug2.0_502.1_07605.t1 | gi|548361054|ref|XP_005731358.1| | PREDICTED: flocculation protein FLO11-like isoform X3 [Pundamilia nyererei] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_502.1_07605.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_502.1_07605.t1 atgtcgggagcgctatgtgtcagtaaatatgctttgcttgccgatctgcagtccacaacctcgcaagccaactcgtacca tgttcaaggcggctctcagcaacagaacaatgtaaccaatagttacagtaaccatgacaacagggaacaaagtgagacac cacctcctctgcctccaccacccccacaggaactgcttgatggaataccaccacccagggaatatgctataaatcagcca acatatgagagcagctatgtgggcgagcaccacacgtcttccaccagataccatcaggaccacacccctacgccccacag tggagggtaccccatagagcggtcccctgtccctcagagcccaggatactcggaaccgtctgcagtgcccggcgggtacc ctatagaacgttcccctcacagccccggatactcagagccatctcccctgcccggcgggtacatcgacccagtgccgggc tcacagcagcccagacagatgtctgctcttagtaataacttgtccgagttggaccaactactccaggatctgaattcagc acagttcatggcagaggtcgataaaagaaatgttgcccctgccccacacatggtaaatggagggaacaaacaaggcccac ctgccgtagctccaaaaccaacgagaacggaaaaacgaagctctgtggacggtctactagacatgctagaggaggcccag cccgaccccccacagagtactcactattcaagcgcccctgtccctgatcattatgaccacgccccccactcagggacaca acaatacatacccagtcatgcacagcataatggcacacaggagatgatcaagcctcaggccgcttctacagccaccaagg aattggacgacctgatggccacactctctggattcaaggtcagtaacaacgctcctcaaggtccttatatcacctggtca gaagtaaactcttctgatgaccaggtgaaaataagcccactcggtcaggttataacagctctaggaaagatctggcatat tgaacactttgtgtgcggtaattgtaacttgccgctgggaaccaagaatttttacgagagggacggtggagcgtactgtg aggaatgctatcacaggatatttgctccgaagtgtgcctactgtaatggacctatcgttgacaaatgtgttactgctctg gacatgacgtggcatcctgaccatttcttctgtgctcagtgtggaaatccatttggtgacgatggattccatgaaaaaga cggaaaagcttactgcagaatttgttatttggaaatgtttgccccaagatgtggtggatgtggaaagccaatactagata actacatatctgctctgaacagacactggcatcctgagtgcttcgtgtgtagggagtgtcatatgccattcggaggccgc agcttctttgatcatgaaggtcagccttactgtgaaacccattaccaccttaaacgtggatcactgtgtgccagctgtca gaaaccaataacggggcggtgtattacggcaatgtacaaaaagttccatcccgagcatttcgtctgtgcattctgtttga aacagctcaataaggggacgttcaaagagcagaacgataaaccttactgtcatccatgttttgtgaagctctttggttag |
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Protein
| Protein ID | pfu_aug2.0_502.1_07605.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_502.1_07605.t1 MSGALCVSKYALLADLQSTTSQANSYHVQGGSQQQNNVTNSYSNHDNREQSETPPPLPPPPPQELLDGIPPPREYAINQP TYESSYVGEHHTSSTRYHQDHTPTPHSGGYPIERSPVPQSPGYSEPSAVPGGYPIERSPHSPGYSEPSPLPGGYIDPVPG SQQPRQMSALSNNLSELDQLLQDLNSAQFMAEVDKRNVAPAPHMVNGGNKQGPPAVAPKPTRTEKRSSVDGLLDMLEEAQ PDPPQSTHYSSAPVPDHYDHAPHSGTQQYIPSHAQHNGTQEMIKPQAASTATKELDDLMATLSGFKVSNNAPQGPYITWS EVNSSDDQVKISPLGQVITALGKIWHIEHFVCGNCNLPLGTKNFYERDGGAYCEECYHRIFAPKCAYCNGPIVDKCVTAL DMTWHPDHFFCAQCGNPFGDDGFHEKDGKAYCRICYLEMFAPRCGGCGKPILDNYISALNRHWHPECFVCRECHMPFGGR SFFDHEGQPYCETHYHLKRGSLCASCQKPITGRCITAMYKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCHPCFVKLFG |
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