Gene
| Gene Model ID | pfu_aug2.0_502.1_07606 |
|---|---|
| Locus | scaffold502.1 : 212133 ... 227226 : + |
| To GenomeBrowser | scaffold502.1:212133..227226 |
| Genes list of scaffold | scaffold502.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| suppressor of tumorigenicity 14 protein | GO:0003824 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_502.1_07606.t1 | 3 | 1 | Ig_2 | 15 | 59 | 2.8e-08 | 33.7 | 0.7 | 3400.0 | -1.8 |
| pfu_aug2.0_502.1_07606.t1 | 3 | 1 | Ldl_recept_a | 50 | 86 | 4.7e-26 | 90.4 | 2.6e-11 | 1.3e-07 | 31.3 |
| pfu_aug2.0_502.1_07606.t1 | 3 | 2 | Ldl_recept_a | 106 | 138 | 4.7e-26 | 90.4 | 5.9e-13 | 2.9e-09 | 36.6 |
| pfu_aug2.0_502.1_07606.t1 | 3 | 2 | Ig_2 | 139 | 169 | 2.8e-08 | 33.7 | 3.0 | 15000.0 | -6.5 |
| pfu_aug2.0_502.1_07606.t1 | 3 | 3 | Ldl_recept_a | 159 | 195 | 4.7e-26 | 90.4 | 3.3e-12 | 1.6e-08 | 34.2 |
| pfu_aug2.0_502.1_07606.t1 | 1 | 1 | I-set | 273 | 363 | 4.5e-12 | 45.6 | 3.2e-15 | 1.6e-11 | 43.8 |
| pfu_aug2.0_502.1_07606.t1 | 3 | 3 | Ig_2 | 280 | 363 | 2.8e-08 | 33.7 | 5.6e-12 | 2.8e-08 | 33.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_502.1_07606.t1 | gi|585662687|ref|XP_006816793.1| | PREDICTED: sortilin-related receptor-like, partial [Saccoglossus kowalevskii] | 5.0e-20 |
| pfu_aug2.0_502.1_07606.t1 | gi|507689276|ref|XP_004641484.1| | PREDICTED: suppressor of tumorigenicity 14 protein [Octodon degus] | 2.0e-19 |
| pfu_aug2.0_502.1_07606.t1 | gi|533126886|ref|XP_005378621.1| | PREDICTED: suppressor of tumorigenicity 14 protein homolog isoform X1 [Chinchilla lanigera] | 8.0e-19 |
| pfu_aug2.0_502.1_07606.t1 | gi|675695291|ref|XP_009005366.1| | PREDICTED: suppressor of tumorigenicity 14 protein [Callithrix jacchus] | 8.0e-19 |
Transcript
| Transcript ID | pfu_aug2.0_502.1_07606.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_502.1_07606.t1 atgaccatgatgtgccgtcaacagcggaggacgttccagatcttgcaaaagaaaggagaggatctacaacaagactcttg cagcaccccacagcaaaacgccgaaacaaaacagccgtgccaaaccacaacaatatcaccaggttcagcatgtaataaac aaagggaatttacatgtgtgagtggtggctgtgtagattataaatacatgtgtgatggtaactatgactgtggtgatcat tctgatgaacgcttttgtaacattcaacaaagtacgacccagcatccaaagagcagctttacaatctgtaatatgcaata tgaatacacatgtactaacaggaagtgtataagcagccattacctctgtaatggtattaatgactgcggagataactcag atgaagcttattgtaacatactgagacctagcacaaattcctcacccagaacaacacaaagcgctacaatatcatcgtgc aacacacaaaacgagtatacatgtgtcaaccggaagtgcgttagccgccatcaaatgtgcaatggtgtaaatgactgcgg agataattccgatgaagcgtattgtaaccaaataaaaacaagtacaatggaaacctcagtgaacgatgttctgagaaatg gtgatgtagtcacagggattctactactggaaaggggaccatcatggatactttttaaatgcttttctaccagaagtccc atattatcagaattcctgttcaccagtgatgtgccttctaatgcattggacgggacgagtccagtcatccctagaggtac tgttgccatggctgtttttccatcagaagtagacactatttatgtcaaaaggggatcacagacgagggtgatatgtgagg catacggaaatccaaagcccctcattgaatggaagaagaatggacaaatcaaggaaggggaaaaagattttgggagtctt gattgggataaattcttggaatatcagtcactaagaatcacaagcatggatgtttcgaacgctggggaatattgttgtca ggctaggcttccagggaacactgtgacgaaatccataaatattcaagtttgtgatccagcaacagtcagtttttcaacaa cggaggatggcactcatataaacgcaactttgtcagctacccaagacgaaacaagcaagatatttagcgccgactgctac aaaggaaacagggcaacaaatggcgcatggataaaggattatgatgcgtcagtcagcataattagaacagagagtgatac gatgtgggaacagatctactcctggagcattgttgataaaaaggaggtaccaagagaaatgtactgcgaaatattttcca attgtgttattgagcctatgacatttaagctgaacgtataa |
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Protein
| Protein ID | pfu_aug2.0_502.1_07606.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_502.1_07606.t1 MTMMCRQQRRTFQILQKKGEDLQQDSCSTPQQNAETKQPCQTTTISPGSACNKQREFTCVSGGCVDYKYMCDGNYDCGDH SDERFCNIQQSTTQHPKSSFTICNMQYEYTCTNRKCISSHYLCNGINDCGDNSDEAYCNILRPSTNSSPRTTQSATISSC NTQNEYTCVNRKCVSRHQMCNGVNDCGDNSDEAYCNQIKTSTMETSVNDVLRNGDVVTGILLLERGPSWILFKCFSTRSP ILSEFLFTSDVPSNALDGTSPVIPRGTVAMAVFPSEVDTIYVKRGSQTRVICEAYGNPKPLIEWKKNGQIKEGEKDFGSL DWDKFLEYQSLRITSMDVSNAGEYCCQARLPGNTVTKSINIQVCDPATVSFSTTEDGTHINATLSATQDETSKIFSADCY KGNRATNGAWIKDYDASVSIIRTESDTMWEQIYSWSIVDKKEVPREMYCEIFSNCVIEPMTFKLNV |
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