Gene
| Gene Model ID | pfu_aug2.0_504.1_14232 |
|---|---|
| Locus | scaffold504.1 : 90746 ... 98075 : - |
| To GenomeBrowser | scaffold504.1:90746..98075 |
| Genes list of scaffold | scaffold504.1 |
| Synonym | pfu_aug1.0_1823.1_58662 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear respiratory factor 1 isoform x2 | GO:0000980 GO:0001190 GO:0001205 GO:0005515 GO:0005634 GO:0005667 GO:0007005 GO:0030218 GO:0045944 GO:0050896 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_504.1_14232.t1 | 1 | 1 | Nrf1_DNA-bind | 70 | 283 | 0.0 | 366.9 | 0.0 | 0.0 | 366.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_504.1_14232.t1 | gi|562861012|ref|XP_006158876.1| | PREDICTED: nuclear respiratory factor 1 isoform X1 [Tupaia chinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_504.1_14232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14232.t1 atgaataacgtcatgacttcatcggtgaccaatccagacgcagggacactgacgatatcaactacagaaatagtcagtgt tgacaatgttgatatgagcggagatgacctcagtgaaccaagttcaccagagagttctttcgacacgtcagatctacttg gtcctgaaagcatacatgatgaggtcaccgtacagctggcatcctcaggcacagttggaatggcagctgctgcagctata gctactgctaaaaaaagaaaacgtcctcacgtgtttgaaacaaatccttctatccgtaaacggcaacagacaaggcttct aagaaaactcaagacttgtatagaggagtatacaacaagagtgggacaacaagccgttgtgttgtgttgtactccaggaa aagtacagaacaacaacaacttcaaagtgtttggctcacagcctctggaaaatgtgatgagaaattgtaaaactgtagtg ctaggagacctagaatgtacattggcagaacagttaccacaaaatcaagataatcaaggaatgcatgagttacctccctt atcaatagatggcataccgacatctgtagataaaatgacacaagcacagttgcggacattcatccctgaaatgttaaagt tttcaacaaacagaagtaagccaggttggggtaaagcagagttcaaaccagtatggtggccagacagtgtaccttgggct aacgttagaagtgatgtcagaacaccacaacagaaaaaggaggtatcttggacagaggctttacggaccatagtttacca ctgctacaagcatcatggcagagaagatcttttacatgcctttgagggccaggagcagagttctgccgctcagtcaagaa caatgttccagactataaataaccctgacggaactgtctcaatcatacaaatagaaacagcccctaaccaggtggtaact ttaccagatggtacccaggctactgttgtacatacgatacaagatggaatacctctacatgaagctaatcaagcagtaaa aactctagcagatgttgcctccaatcagcaagaggctagcgctctacaaatgacgcccgtcagtgttgaaatgaactcgg atactgttaggcataatattgcaacaatctcagaggaaggacatattgtactcacaggagacgatttaggaactacgtca ggtatcatgataccagtctcggtttatcaacctttgtcacagccaaacatgacatatacaaatttacagacgcaaggaga taatttacaggttgctatggcaccaatcaccatggaaaccaagcaagaaacaacagaaaacagtgagcaaggggaactta atgatcaaaatcaggacattatttcaggtgcaattgatcaaagtaacaatgtgacagatacatga |
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Protein
| Protein ID | pfu_aug2.0_504.1_14232.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14232.t1 MNNVMTSSVTNPDAGTLTISTTEIVSVDNVDMSGDDLSEPSSPESSFDTSDLLGPESIHDEVTVQLASSGTVGMAAAAAI ATAKKRKRPHVFETNPSIRKRQQTRLLRKLKTCIEEYTTRVGQQAVVLCCTPGKVQNNNNFKVFGSQPLENVMRNCKTVV LGDLECTLAEQLPQNQDNQGMHELPPLSIDGIPTSVDKMTQAQLRTFIPEMLKFSTNRSKPGWGKAEFKPVWWPDSVPWA NVRSDVRTPQQKKEVSWTEALRTIVYHCYKHHGREDLLHAFEGQEQSSAAQSRTMFQTINNPDGTVSIIQIETAPNQVVT LPDGTQATVVHTIQDGIPLHEANQAVKTLADVASNQQEASALQMTPVSVEMNSDTVRHNIATISEEGHIVLTGDDLGTTS GIMIPVSVYQPLSQPNMTYTNLQTQGDNLQVAMAPITMETKQETTENSEQGELNDQNQDIISGAIDQSNNVTDT |
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