Gene
| Gene Model ID | pfu_aug2.0_504.1_14233 |
|---|---|
| Locus | scaffold504.1 : 116236 ... 122885 : + |
| To GenomeBrowser | scaffold504.1:116236..122885 |
| Genes list of scaffold | scaffold504.1 |
| Synonym | pfu_aug1.0_1823.1_58660 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_504.1_14233.t1 | 3 | 1 | DUF1399 | 25 | 106 | 2.0e-37 | 128.5 | 2.4e-10 | 3.6e-06 | 27.3 |
| pfu_aug2.0_504.1_14233.t1 | 3 | 2 | DUF1399 | 125 | 235 | 2.0e-37 | 128.5 | 9.1e-33 | 1.4e-28 | 99.9 |
| pfu_aug2.0_504.1_14233.t1 | 3 | 3 | DUF1399 | 262 | 277 | 2.0e-37 | 128.5 | 1.0 | 15000.0 | -4.1 |
Transcript
| Transcript ID | pfu_aug2.0_504.1_14233.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14233.t1 atggaaaacaaatccggtctgtgtccttcagcaggtatagggttagggatattgaatgtgtcgtcacagagtcccagtac atttcagtttggagttgatctctctgatgctgtgctgaaggaagtgacattccttaaagaaatagacaaacatcgcaccc tctatggcgggcccctgctaaagcaggcaatattcagatatgaaaaactttggctacccttcgctgcgaagtacaagaat cagactctagcggcaccactagacatatcctgggtatggcactgtcatatgttggcaccgcgctgctacgtcaaagattg tctaaatatatgtggcgtcattgtagatcacagtttgacaccaacgtgtgataaggagaccgtgcaacagcactggagtg aagcatatcctgaccacccatataacgttgacgtttcaaatgaaaccacatatattgatgtggcgtcatccatttctaaa ctaggctacaatctcgaagaagcagcttcgcgccagaaggttttttactatcaagtttcactgccccattaccaagatac taagttcattgagagcgctattggaagataccgaaaatttttagaacttaaacaatgctatccaaccttcttcatcgtgc catgctatgacgttgacgtcgtttggcatgcacatcagttacatccagtgacgtacaaagaggatacgaaagtcttgctg agagaacattttaatcatgacgattctgtgaacgacaggtcaccggggtcaaagctgaatgtatcggattctgaaacgcg caccatatggaagaaaaagtatggagaaaattttgcaagttttggtgccatgtttcgtggcctgccacctaacggcaaac ttcacaaaatgtcattggagaaaatgataattcaatatcccaaaaaggtttccatagttatacaacaagtacatgtagca gacgagtctgtcgcaaagaaaacgcggtcactagaatttaatggcattttgaaatcgggtaccgagcttaagttactaaa gatgaagaaaccagccatcggtaaagggatgtggaacgcggacacgcatgtacaagaaaaacgggaactggaattcgaca caggcatatgcgaaagatttacggtagccttgtacaagaaaggattattcggaaatatgggaccaaagaatatagaagga aaagcctcactagatattctaagattcatcaataagtgtagggctgtgaatgtcactgaaaatcaaacggtagaacttac tgtaggaagtacaaacgttagaatagattttgatctgacgatagtcaagtacaaggatatatcatacactttttcccctg gtacatatgaagaatgcataatgccggagtttctggaggacctatggggccctgtccctctgacaaggctgcccaaaggg caggacaacaaatgttatgtggcaagccacaggttgaggacgacaaatggaactgtggagttcaccgttcggaccatcca cagcttgccttgtttaatgtccgtcgtccatgtattttaccatgataagctgtccgtagtttgtcatctcataggaccag atacgttaccccgacgtgatcaggtgacaaaaaagaccaagttaacactgacaccgtccaaaggagaaagagccgtagtg ataaagaacaacgatggtgattgggctgttctaacgggaaactggacggggcttaggaaggggataccgggaaaaccagg gaggagaggaattcctggtagtccaggacatttgaaaataagcttgtacaaaatggccacaggaaaatggacacgcctct cgctgaaaaactggaacaacaccaaagatttctcatttaccttagacggagtccatgtcgatatgaaccttaacttgatc aaatgtagcgcaacagaaggggatgatccagaagttccagagaatcttggtttggcattgtccattttgctacttcatgt actctgtcagccccgcccctcggactgggaggcaagaaaatctctgattccagcaaaaaaggcaactcgcggagggaggg cgatccgccatcttgctgtagaggactatggactgattttagggatgggactatttgttccaaccccttgcaatcactat ctgcgtcataaatatatgggagtgagaagtcacggaagttcggttgccggagcttttagagaggatcagagtgtgttaat ggacgaagcacttgctggatattataccgagggtattcacaatgacactgccggagatgacgaatcggcaggttgcggag ggtgtggtggatgcgggggagggggaatgttgggaggatatggcgggggaggatggagtggtggaggggttggaggtagt gatggggatagtgatgacgggggagggccgggatacagcggaggtagaggaggaggtggtggcggaggtgattggggtag ttatgatagtagtgatgatgatgatgatgattatggaggaggagggggagacggcggcggaggagggggagacgacgggg gaggagggggagacagcggggcaggaggaggaggaggaagttgcggaggtggtgacggagctggtgatagcggtggtgat gacgggggaggagactctggagggggagggtttgatagcggaggagggggaggcggaggttgtgggggagggggttgtgg aggtggaggctgtgggggttgtggaggatga |
|
Protein
| Protein ID | pfu_aug2.0_504.1_14233.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14233.t1 MENKSGLCPSAGIGLGILNVSSQSPSTFQFGVDLSDAVLKEVTFLKEIDKHRTLYGGPLLKQAIFRYEKLWLPFAAKYKN QTLAAPLDISWVWHCHMLAPRCYVKDCLNICGVIVDHSLTPTCDKETVQQHWSEAYPDHPYNVDVSNETTYIDVASSISK LGYNLEEAASRQKVFYYQVSLPHYQDTKFIESAIGRYRKFLELKQCYPTFFIVPCYDVDVVWHAHQLHPVTYKEDTKVLL REHFNHDDSVNDRSPGSKLNVSDSETRTIWKKKYGENFASFGAMFRGLPPNGKLHKMSLEKMIIQYPKKVSIVIQQVHVA DESVAKKTRSLEFNGILKSGTELKLLKMKKPAIGKGMWNADTHVQEKRELEFDTGICERFTVALYKKGLFGNMGPKNIEG KASLDILRFINKCRAVNVTENQTVELTVGSTNVRIDFDLTIVKYKDISYTFSPGTYEECIMPEFLEDLWGPVPLTRLPKG QDNKCYVASHRLRTTNGTVEFTVRTIHSLPCLMSVVHVFYHDKLSVVCHLIGPDTLPRRDQVTKKTKLTLTPSKGERAVV IKNNDGDWAVLTGNWTGLRKGIPGKPGRRGIPGSPGHLKISLYKMATGKWTRLSLKNWNNTKDFSFTLDGVHVDMNLNLI KCSATEGDDPEVPENLGLALSILLLHVLCQPRPSDWEARKSLIPAKKATRGGRAIRHLAVEDYGLILGMGLFVPTPCNHY LRHKYMGVRSHGSSVAGAFREDQSVLMDEALAGYYTEGIHNDTAGDDESAGCGGCGGCGGGGMLGGYGGGGWSGGGVGGS DGDSDDGGGPGYSGGRGGGGGGGDWGSYDSSDDDDDDYGGGGGDGGGGGGDDGGGGGDSGAGGGGGSCGGGDGAGDSGGD DGGGDSGGGGFDSGGGGGGGCGGGGCGGGGCGGCGG |
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