Gene
Gene Model ID | pfu_aug2.0_504.1_14234 |
---|---|
Locus | scaffold504.1 : 125086 ... 137315 : + |
To GenomeBrowser | scaffold504.1:125086..137315 |
Genes list of scaffold | scaffold504.1 |
Synonym | pfu_aug1.0_67972.1_41876 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_504.1_14234.t1 | 4 | 1 | DUF1399 | 11 | 87 | 3.5e-40 | 137.4 | 4.1e-10 | 6.0e-06 | 26.5 |
pfu_aug2.0_504.1_14234.t1 | 4 | 2 | DUF1399 | 108 | 151 | 3.5e-40 | 137.4 | 1.2e-07 | 0.0018 | 18.5 |
pfu_aug2.0_504.1_14234.t1 | 4 | 3 | DUF1399 | 173 | 280 | 3.5e-40 | 137.4 | 1.4e-31 | 2.0e-27 | 96.1 |
pfu_aug2.0_504.1_14234.t1 | 4 | 4 | DUF1399 | 349 | 368 | 3.5e-40 | 137.4 | 1.0 | 15000.0 | -4.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_504.1_14234.t1 | gi|676486816|ref|XP_009064096.1| | hypothetical protein LOTGIDRAFT_167966 [Lottia gigantea] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_504.1_14234.t1 |
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Definition | - |
>pfu_aug2.0_504.1_14234.t1 atgtcgtcgcctaatcccagtacataccattttggagtcgatctctctgatgccgtattgagggaggtgtcattcctaaa agaaatagataaacatcgcgccctctatggcggacccctgttaaagcaggcaatattcagatatgaaaaactttggctcc cctttgctgcgaaatacgagaaccagatcttggcggcaccactagacatatcctgggtatggcactgccatatgttggca ccgcgctgctacgtcaaggattgtctaaatatatgtggcgtcattgtagatcacagtttgacgccaacgtgtgacgggga cactgtacaacgatatgaaaaactctggctcccttttgctgcgaaatacgagaaccagatcttggcggcaccactagaca tatcttgggtatggcactgtcatatgttggcaccactctactacgtcaaggattgtcgaaatatatgtggcgtcattgta gatcacagtttgacgccaacgtgtgatggggacactgtacaacggtactggaaagaagcatatcccgaccacccgtatca cgtggacgtttcccaggaaacaacatatattgacgtaacgtcattcgtatctaaactaggctacaatctcgaagaagcag cttcgcgccaaaaagtgttttactatcaagtttcactgccccattaccaagatacaaagttcattgaaagcgctattgga agataccgaaaattcttagaacttaaacaatgctacccaacaagtttcatcgtgccatgctatgacgtcgacgtcgtttg gcatgcgcatcaggtacatccagtgacgtacaaaaaggatacggaagtcttgctcagcgaacactttaaccacgacgatt ctgtgaacgacaggtcaccgggatcaaggttgaatgtttcagatgctgaaacacgcgtcatatggcgcgaaaaatatggg gaaaattttgcaagttatggtgccatgtttcgtggcctgccacctaacggcaaacttcacaaaatgtcacaggaggaaat ttttagacagtgttcgaaacaggtttcgatagttatacaacaagtacatgtatcagacgaatctgtggcaaagaaaacac ggtcacttgaattcgatgccattttaaagtccggcatcgtgctgaatttactaaagatgaagaaaccagccattggtaaa gggatgtggaacaccgatacccattcacaagaacaacgggaattagaattcgacacaggcatgtgcgaaaaacttacggt ggccttgtacaagaaaggattgtttggaaatgtgggaccaaaaaatatagtaggaaaagcctccttagatattcttagac tcatcaataattgtaaggccctgcatgtaactgaaactcagacgatagagccaactttgggaaatacaaacattagacta gatttgaatctaaggattgtaaagctgggggatataccatacacttttgaccctggtacatatgaagaatgcataatgcc ggagtttctggaggacctatggggtcctgtacctcttaccaggttaccagagggacaggacaacaaatgnagactcatca ataattgtaaggccctgcatgtaactgaaactcagacggtagagcctactttgggaaatacaaacattagactagacttg aatctaaggattgtaaagctgggggatataccatacacctttgaccctggtacatatgaagaatgcataatgccggagtt tctagaggacctatggggtcctgtacctcttaccaggttaccagagggacaggacaacaaatgtaatgtggcaagccaca ggctgaggacagcaaatgggtctgtggagttcaccgttcggaccattcatagcttaccttgtttaatgtccgtcgttcat gtatttcatcatgacaagctgtctgtagtctgtcatctcataggaccagatacgctaccccatccagatcaggtgacaac tgataccaagttgacgctgacaccgtcaaaaggagaaagagccgttgtgataaagaacaacgatggtgattgggctgttc taacggggtactggactgggatcaggaaggggataccaggaagaccagggatgcgaggaattcccggtagtccaggacat ttaaaactgaacatgtacaaaattgccacagggaaatggacaagcatctcgtacagtacaagtgatttctcatttagcgt ggacggtgttcatgtcgatatgcagaggaacttgatcgaatgtagcgcagcagaaggagatgttccagagaacctgggtt tggcattgtctattttgctacttcatgttctttgtcaaccccgcccctcgaactgggaggctggacaatccctgacacca gcgacaaagtcaactcgcggagggagggcgatccgccatctcgctgtagaggactatgggcttatgttagcaatgggttt acttgttacaaccccatgtaatcactatttacgccatagattcatgggtgaaaggaaccatggatgttacgttgccggag gggacgggacagtcagtggtccctcggatgacgtacatcatgatgacgtaactgatggagatggtgatcccgggggttgt ggaggttgtggtggatgcgggggaggtggagggtggggagacggcgggggaggatggggtggtggtggaggggatggaga tggtggtggtggtggtgacgggggagggggattttggggaggagactttggagggggaggatttgatagcggaggaggag gggacggtgggggatgtgggggaggggttgcggtgggggaggttgtgggggctgcggggctgatggtcaaaactgtcaca tga |
Protein
Protein ID | pfu_aug2.0_504.1_14234.t1 |
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Definition | - |
>pfu_aug2.0_504.1_14234.t1 MSSPNPSTYHFGVDLSDAVLREVSFLKEIDKHRALYGGPLLKQAIFRYEKLWLPFAAKYENQILAAPLDISWVWHCHMLA PRCYVKDCLNICGVIVDHSLTPTCDGDTVQRYEKLWLPFAAKYENQILAAPLDISWVWHCHMLAPLYYVKDCRNICGVIV DHSLTPTCDGDTVQRYWKEAYPDHPYHVDVSQETTYIDVTSFVSKLGYNLEEAASRQKVFYYQVSLPHYQDTKFIESAIG RYRKFLELKQCYPTSFIVPCYDVDVVWHAHQVHPVTYKKDTEVLLSEHFNHDDSVNDRSPGSRLNVSDAETRVIWREKYG ENFASYGAMFRGLPPNGKLHKMSQEEIFRQCSKQVSIVIQQVHVSDESVAKKTRSLEFDAILKSGIVLNLLKMKKPAIGK GMWNTDTHSQEQRELEFDTGMCEKLTVALYKKGLFGNVGPKNIVGKASLDILRLINNCKALHVTETQTIEPTLGNTNIRL DLNLRIVKLGDIPYTFDPGTYEECIMPEFLEDLWGPVPLTRLPEGQDNKXRLINNCKALHVTETQTVEPTLGNTNIRLDL NLRIVKLGDIPYTFDPGTYEECIMPEFLEDLWGPVPLTRLPEGQDNKCNVASHRLRTANGSVEFTVRTIHSLPCLMSVVH VFHHDKLSVVCHLIGPDTLPHPDQVTTDTKLTLTPSKGERAVVIKNNDGDWAVLTGYWTGIRKGIPGRPGMRGIPGSPGH LKLNMYKIATGKWTSISYSTSDFSFSVDGVHVDMQRNLIECSAAEGDVPENLGLALSILLLHVLCQPRPSNWEAGQSLTP ATKSTRGGRAIRHLAVEDYGLMLAMGLLVTTPCNHYLRHRFMGERNHGCYVAGGDGTVSGPSDDVHHDDVTDGDGDPGGC GGCGGCGGGGGWGDGGGGWGGGGGDGDGGGGGDGGGGFWGGDFGGGGFDSGGGGDGGGCGGGVAVGEVVGAAGLMVKTVT |