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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_504.1_14234
Locus scaffold504.1 : 125086 ... 137315 : +
To GenomeBrowser scaffold504.1:125086..137315
Genes list of scaffold scaffold504.1
Synonym pfu_aug1.0_67972.1_41876

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_504.1_14234.t1 4 1 DUF1399 11 87 3.5e-40 137.4 4.1e-10 6.0e-06 26.5
pfu_aug2.0_504.1_14234.t1 4 2 DUF1399 108 151 3.5e-40 137.4 1.2e-07 0.0018 18.5
pfu_aug2.0_504.1_14234.t1 4 3 DUF1399 173 280 3.5e-40 137.4 1.4e-31 2.0e-27 96.1
pfu_aug2.0_504.1_14234.t1 4 4 DUF1399 349 368 3.5e-40 137.4 1.0 15000.0 -4.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_504.1_14234.t1 gi|676486816|ref|XP_009064096.1| hypothetical protein LOTGIDRAFT_167966 [Lottia gigantea] 0.0

Transcript
Transcript IDpfu_aug2.0_504.1_14234.t1
Definition-
>pfu_aug2.0_504.1_14234.t1
atgtcgtcgcctaatcccagtacataccattttggagtcgatctctctgatgccgtattgagggaggtgtcattcctaaa
agaaatagataaacatcgcgccctctatggcggacccctgttaaagcaggcaatattcagatatgaaaaactttggctcc
cctttgctgcgaaatacgagaaccagatcttggcggcaccactagacatatcctgggtatggcactgccatatgttggca
ccgcgctgctacgtcaaggattgtctaaatatatgtggcgtcattgtagatcacagtttgacgccaacgtgtgacgggga
cactgtacaacgatatgaaaaactctggctcccttttgctgcgaaatacgagaaccagatcttggcggcaccactagaca
tatcttgggtatggcactgtcatatgttggcaccactctactacgtcaaggattgtcgaaatatatgtggcgtcattgta
gatcacagtttgacgccaacgtgtgatggggacactgtacaacggtactggaaagaagcatatcccgaccacccgtatca
cgtggacgtttcccaggaaacaacatatattgacgtaacgtcattcgtatctaaactaggctacaatctcgaagaagcag
cttcgcgccaaaaagtgttttactatcaagtttcactgccccattaccaagatacaaagttcattgaaagcgctattgga
agataccgaaaattcttagaacttaaacaatgctacccaacaagtttcatcgtgccatgctatgacgtcgacgtcgtttg
gcatgcgcatcaggtacatccagtgacgtacaaaaaggatacggaagtcttgctcagcgaacactttaaccacgacgatt
ctgtgaacgacaggtcaccgggatcaaggttgaatgtttcagatgctgaaacacgcgtcatatggcgcgaaaaatatggg
gaaaattttgcaagttatggtgccatgtttcgtggcctgccacctaacggcaaacttcacaaaatgtcacaggaggaaat
ttttagacagtgttcgaaacaggtttcgatagttatacaacaagtacatgtatcagacgaatctgtggcaaagaaaacac
ggtcacttgaattcgatgccattttaaagtccggcatcgtgctgaatttactaaagatgaagaaaccagccattggtaaa
gggatgtggaacaccgatacccattcacaagaacaacgggaattagaattcgacacaggcatgtgcgaaaaacttacggt
ggccttgtacaagaaaggattgtttggaaatgtgggaccaaaaaatatagtaggaaaagcctccttagatattcttagac
tcatcaataattgtaaggccctgcatgtaactgaaactcagacgatagagccaactttgggaaatacaaacattagacta
gatttgaatctaaggattgtaaagctgggggatataccatacacttttgaccctggtacatatgaagaatgcataatgcc
ggagtttctggaggacctatggggtcctgtacctcttaccaggttaccagagggacaggacaacaaatgnagactcatca
ataattgtaaggccctgcatgtaactgaaactcagacggtagagcctactttgggaaatacaaacattagactagacttg
aatctaaggattgtaaagctgggggatataccatacacctttgaccctggtacatatgaagaatgcataatgccggagtt
tctagaggacctatggggtcctgtacctcttaccaggttaccagagggacaggacaacaaatgtaatgtggcaagccaca
ggctgaggacagcaaatgggtctgtggagttcaccgttcggaccattcatagcttaccttgtttaatgtccgtcgttcat
gtatttcatcatgacaagctgtctgtagtctgtcatctcataggaccagatacgctaccccatccagatcaggtgacaac
tgataccaagttgacgctgacaccgtcaaaaggagaaagagccgttgtgataaagaacaacgatggtgattgggctgttc
taacggggtactggactgggatcaggaaggggataccaggaagaccagggatgcgaggaattcccggtagtccaggacat
ttaaaactgaacatgtacaaaattgccacagggaaatggacaagcatctcgtacagtacaagtgatttctcatttagcgt
ggacggtgttcatgtcgatatgcagaggaacttgatcgaatgtagcgcagcagaaggagatgttccagagaacctgggtt
tggcattgtctattttgctacttcatgttctttgtcaaccccgcccctcgaactgggaggctggacaatccctgacacca
gcgacaaagtcaactcgcggagggagggcgatccgccatctcgctgtagaggactatgggcttatgttagcaatgggttt
acttgttacaaccccatgtaatcactatttacgccatagattcatgggtgaaaggaaccatggatgttacgttgccggag
gggacgggacagtcagtggtccctcggatgacgtacatcatgatgacgtaactgatggagatggtgatcccgggggttgt
ggaggttgtggtggatgcgggggaggtggagggtggggagacggcgggggaggatggggtggtggtggaggggatggaga
tggtggtggtggtggtgacgggggagggggattttggggaggagactttggagggggaggatttgatagcggaggaggag
gggacggtgggggatgtgggggaggggttgcggtgggggaggttgtgggggctgcggggctgatggtcaaaactgtcaca
tga

Protein
Protein IDpfu_aug2.0_504.1_14234.t1
Definition-
>pfu_aug2.0_504.1_14234.t1
MSSPNPSTYHFGVDLSDAVLREVSFLKEIDKHRALYGGPLLKQAIFRYEKLWLPFAAKYENQILAAPLDISWVWHCHMLA
PRCYVKDCLNICGVIVDHSLTPTCDGDTVQRYEKLWLPFAAKYENQILAAPLDISWVWHCHMLAPLYYVKDCRNICGVIV
DHSLTPTCDGDTVQRYWKEAYPDHPYHVDVSQETTYIDVTSFVSKLGYNLEEAASRQKVFYYQVSLPHYQDTKFIESAIG
RYRKFLELKQCYPTSFIVPCYDVDVVWHAHQVHPVTYKKDTEVLLSEHFNHDDSVNDRSPGSRLNVSDAETRVIWREKYG
ENFASYGAMFRGLPPNGKLHKMSQEEIFRQCSKQVSIVIQQVHVSDESVAKKTRSLEFDAILKSGIVLNLLKMKKPAIGK
GMWNTDTHSQEQRELEFDTGMCEKLTVALYKKGLFGNVGPKNIVGKASLDILRLINNCKALHVTETQTIEPTLGNTNIRL
DLNLRIVKLGDIPYTFDPGTYEECIMPEFLEDLWGPVPLTRLPEGQDNKXRLINNCKALHVTETQTVEPTLGNTNIRLDL
NLRIVKLGDIPYTFDPGTYEECIMPEFLEDLWGPVPLTRLPEGQDNKCNVASHRLRTANGSVEFTVRTIHSLPCLMSVVH
VFHHDKLSVVCHLIGPDTLPHPDQVTTDTKLTLTPSKGERAVVIKNNDGDWAVLTGYWTGIRKGIPGRPGMRGIPGSPGH
LKLNMYKIATGKWTSISYSTSDFSFSVDGVHVDMQRNLIECSAAEGDVPENLGLALSILLLHVLCQPRPSNWEAGQSLTP
ATKSTRGGRAIRHLAVEDYGLMLAMGLLVTTPCNHYLRHRFMGERNHGCYVAGGDGTVSGPSDDVHHDDVTDGDGDPGGC
GGCGGCGGGGGWGDGGGGWGGGGGDGDGGGGGDGGGGFWGGDFGGGGFDSGGGGDGGGCGGGVAVGEVVGAAGLMVKTVT

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