Gene
| Gene Model ID | pfu_aug2.0_504.1_14237 |
|---|---|
| Locus | scaffold504.1 : 190179 ... 195623 : - |
| To GenomeBrowser | scaffold504.1:190179..195623 |
| Genes list of scaffold | scaffold504.1 |
| Synonym | pfu_aug1.0_6191.1_52725 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein sec13 homolog | GO:0000776 GO:0001889 GO:0005635 GO:0007029 GO:0010842 GO:0036372 GO:0042462 GO:0051216 GO:0055123 GO:0070062 GO:0070278 GO:0070971 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_504.1_14237.t1 | 6 | 1 | WD40 | 3 | 19 | 7.4e-30 | 101.7 | 1.1e-05 | 0.17 | 11.8 |
| pfu_aug2.0_504.1_14237.t1 | 6 | 2 | WD40 | 28 | 63 | 7.4e-30 | 101.7 | 3.9e-09 | 5.7e-05 | 22.8 |
| pfu_aug2.0_504.1_14237.t1 | 6 | 3 | WD40 | 63 | 71 | 7.4e-30 | 101.7 | 0.055 | 810.0 | 0.1 |
| pfu_aug2.0_504.1_14237.t1 | 6 | 4 | WD40 | 72 | 124 | 7.4e-30 | 101.7 | 2.5e-12 | 3.6e-08 | 32.9 |
| pfu_aug2.0_504.1_14237.t1 | 6 | 5 | WD40 | 135 | 172 | 7.4e-30 | 101.7 | 3.0e-12 | 4.5e-08 | 32.6 |
| pfu_aug2.0_504.1_14237.t1 | 6 | 6 | WD40 | 191 | 218 | 7.4e-30 | 101.7 | 8.2e-08 | 0.0012 | 18.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_504.1_14237.t1 | gi|676426755|ref|XP_009044725.1| | hypothetical protein LOTGIDRAFT_207505 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_504.1_14237.t1 | gi|524900993|ref|XP_005106911.1| | PREDICTED: protein SEC13 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_504.1_14237.t1 | gi|45360589|ref|NP_988967.1| | protein SEC13 homolog [Xenopus (Silurana) tropicalis] | 0.0 |
| pfu_aug2.0_504.1_14237.t1 | gi|632946672|ref|XP_007888672.1| | PREDICTED: protein SEC13 homolog [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_504.1_14237.t1 | gi|148233584|ref|NP_001080442.1| | SEC13 homolog [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_504.1_14237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14237.t1 atgtttggtagtattttggcttcctgtgggtatgataggaaagtcgtcatatggaaggaaaataacggctcctggggaaa actgtatgaatatctgagtcatgactcttcagtaaattcagtgcaatttgcgtcccaagaatttggtctcattttggctt gtggaagctcagatggcagcatttcaatcatttctagttcaggtgatggaacttgggacgccaagaaaataactaatgca catacgattggatgtaacgctgtgagttgggcccctgccgtgtcaccgagtgccctatttgacctctctggcagaagtca gccgacaaagcgactggtctccgggggctgcgataatctagtcaaaatatggagggaggaagatggaaagtggatagagg ataagaagttagagggacacagtgactgggtcagggacgtagcctgggcaccaagtataggtctacctaccagtatcata gctagttgttcacaagatttccgagtcataatctggacaaatgatggcagcagtaacgagtggaattctcaacttttaca caaatttaacgatgttgtttggcatcttagctggtctataacaggaaatatcctggcatgctcagggggagataacaaag ttagtttgtggaaagaaaatcttgaaggtcagtggatgtgtatcagcgatgtcaacaaaggtcaaggtcaaattacagat ggacagcggtcatccagctaa |
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Protein
| Protein ID | pfu_aug2.0_504.1_14237.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14237.t1 MFGSILASCGYDRKVVIWKENNGSWGKLYEYLSHDSSVNSVQFASQEFGLILACGSSDGSISIISSSGDGTWDAKKITNA HTIGCNAVSWAPAVSPSALFDLSGRSQPTKRLVSGGCDNLVKIWREEDGKWIEDKKLEGHSDWVRDVAWAPSIGLPTSII ASCSQDFRVIIWTNDGSSNEWNSQLLHKFNDVVWHLSWSITGNILACSGGDNKVSLWKENLEGQWMCISDVNKGQGQITD GQRSSS |
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