Gene
| Gene Model ID | pfu_aug2.0_504.1_14238 |
|---|---|
| Locus | scaffold504.1 : 196834 ... 199230 : + |
| To GenomeBrowser | scaffold504.1:196834..199230 |
| Genes list of scaffold | scaffold504.1 |
| Synonym | pfu_aug1.0_7239.1_31357 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_504.1_14238.t1 | 1 | 1 | RVT_1 | 147 | 367 | 5.7e-23 | 81.4 | 1.2e-26 | 9.1e-23 | 80.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_504.1_14238.t1 | gi|585662294|ref|XP_006816725.1| | PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Saccoglossus kowalevskii] | 1.0e-28 |
Transcript
| Transcript ID | pfu_aug2.0_504.1_14238.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14238.t1 atgatgacgcaaagcagacaccctaacaacacctctacacacggcccagtctatggtacaatattactagatatttctct tgagaatgtacataggacactagatagggtcgaaaatcaatttgagagaattaaatgggacaaagttgacaagggtaaat actgtgcagagctaagtaaaaatcttctatgtagtgaaatctccaaggacagtactgcaaacgacatattgtcagctatt gaaacagccataaatacaagcattcaaagctgtaagaaagctaacggcaaaagtgcagacgaaaataacatcacagcaga aagcattaaatttggaggatctgttcttattgactaccttcagatcctctttggaaaaattgtcagtgaaaaggaaattc ctgaacaatttaaatgtgggattataacacctatttataagaagaacaacaaaccacttgaagaccctaactcttacagg cgtataacagtttcaagcatagtaggaaagatgtttgaaaagatacatctggattctatggaatcgctgcttacatcaca acagaatgacctacaaagaggttttacaaaaaatacgtcatcagtgtatgcaggcctaatattaacagaggcactggctg aggctatggacacaaagcaaacactgtatgcaggctttctggacgcatcaaaggcctttgatgtggtctggcacgattct atgctcagaaagttatacatccagggcctagagggaacagactggcttctcttgaagaactggtacactggaatgaggtc aaaggtcaaatggggagggggatattcatcagcatttcttgagtcacaaggagtaagacaaggaggaatctggtcgccaa cagcttataaaatgtttgtaaatccagctctacatctttatgaaacttatcatctgggatttaaaattggatcagtccat ctaggctcaccaacttgtgcagatgatgaaattctgctatcaacgaaatatcaagaattacgaactatggttaacataca agaaacatatgcaaatagagaaaggtacacacttagtgaagcaaagagtaaagtcatggtattcaacaagatggctcgaa ctaaggaggatagtggatatatagaactgaataacaaggaacttgaaattgtagactcctatactcatatagatatcgaa agacacagcaaagttaaagcgggagacaaaggtgaagcagcggtgatgattgcaaggaaaacaacttattcccttatggg tgcaggtttccatggctacaatggcgtaaatccaaaagttagcataaaaatgtgggctatgtatgtacaaggtaaaaccc cgcaagctatatggacttga |
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Protein
| Protein ID | pfu_aug2.0_504.1_14238.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_504.1_14238.t1 MMTQSRHPNNTSTHGPVYGTILLDISLENVHRTLDRVENQFERIKWDKVDKGKYCAELSKNLLCSEISKDSTANDILSAI ETAINTSIQSCKKANGKSADENNITAESIKFGGSVLIDYLQILFGKIVSEKEIPEQFKCGIITPIYKKNNKPLEDPNSYR RITVSSIVGKMFEKIHLDSMESLLTSQQNDLQRGFTKNTSSVYAGLILTEALAEAMDTKQTLYAGFLDASKAFDVVWHDS MLRKLYIQGLEGTDWLLLKNWYTGMRSKVKWGGGYSSAFLESQGVRQGGIWSPTAYKMFVNPALHLYETYHLGFKIGSVH LGSPTCADDEILLSTKYQELRTMVNIQETYANRERYTLSEAKSKVMVFNKMARTKEDSGYIELNNKELEIVDSYTHIDIE RHSKVKAGDKGEAAVMIARKTTYSLMGAGFHGYNGVNPKVSIKMWAMYVQGKTPQAIWT |
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